| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1865 |
|---|
| Symbol | |
|---|
| ID | 3705129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | - |
|---|
| Start bp | 2120745 |
|---|
| End bp | 2123987 |
|---|
| Gene Length | 3243 bp |
|---|
| Protein Length | 1080 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637738344 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343861 |
|---|
| Protein GI | 77165336 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02243] conserved hypothetical protein, phage tail-like region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTC GGCCGGGCAT ATTGCTCGAT GATAGAGACG CGGCGCAGAT CTTAAAGGCA
TTGTTAGCGC GACGGCTCGG TTATGTGCCA GAGTGGGAGC CGCAGGGTCC AGGGTTGGCG
TTGGCCGAGG TTTTTGCCCG TTACTTGCAG ACAATCATTC AGCGCCTGAA CCAGGCGCCG
GATAAAAATA AACTAGCGTT TTTAGATTTA CTGGGTTTGC AGTTAATCCC GGCGCGGGCT
GCCCGGACGC CGATCGTCTT TCGTTTGGCG GAGAATGCTC CTGATGGCAG ATTACCGGCC
GGCACGCGTG TAGCTGCTCC GCCCCCTCCA GAGCAGACCG ATCAGATTAT CTTCGAAACC
GAACGATCGA TCGGATTGAT GACGGCAAGA CTTAAAGAAG TCGTAAGCCT CTGGCCTGGT
CGGGATCAAT ATATCGACCA CAGTGCGGCA TTTATCGCAG GCCGGCCCTT ACAGCCCTTT
AAAAAACGCC AGTTAGAAAA TACGCCCCAT ATCCTCTACT TAGCCCATGA TACGCTGCTA
GCCCTAGCAG GAAAAAGTTT ATTGAATGTC ACGTTTGAGC TAACTAACAC GAGCAGTGAA
CGATTGGACA TTGTATGGGA GTACTGGGAT GGCGAGGTCT GGCGTGAGTT TTTAGCAATG
CGGCCGGCCT GTGATGAAGA AGAAGCACAC AAGTTAGACA GTACTGACGG TCTACAGTAC
AGCGGCCGCT TCCGCCTGCA AGCAGACTGC GCCGAGACAA AAAAAACCAT GGTGAATGGT
GTCGACGCCT TCTGGATTCG CGGCCAGTTG GCAGAGCCCT TGCCCTTGGA TCCGGAGCAG
ATATTACCTG AGGTGGAGAG CATTCAGATT GGGGCGGAGA TCGCTTCTAC TTCCCCTATT
GAGGTAACTA TCGAAGAGGC TATCGATATT GAGAAAGCTA TCAAAAAGGT TATCGAGTCC
AAAAAGGTTA TCGAGTCGCC TGCAACGGGT GGTTTAATCC TAGACAAGGC TTTTTCCGAT
GCGACAGACA TCGATGTGAC TAAACCTTTC TTTCCTCTTG GCTTACAACC TCAGCCCGGT
TCAGTGTTTT ATTTTACCAA TGCCGAAGTC TTCAGTAAGC CAGGGGCAAG AGTGCGACTC
TATATCGGAA AAACAGTGAC GCCATCCGAT CAGCTCGTGA CGAATTCGAC GAGTGACGGG
CTCAGAATGA CCACTGATAC AAATAATTCG CAATTGCCCC ACGAAGTCAG CTGGGAATAT
TGGAACGGAC GAAAGTGGGA AGTTTTAATA ACCTATAGCA ATGATCCCAA TGGCTCCAGT
GCTTTATCGA AGTCTCCACA AGATTTTAGC GATAGCGGCT TTATTGATTT AATTATCCCA
ACGGATATGG CCCCAACCAC AATCAATGAG GAGGAAGGGC TGTGGATGCG GGTACGTTTA
TTGAGCGGGG GTTATGGCTT CAAAAGTTCT ATTTCTACTG GCGACTCTTT AACTGAATTC
CCCTTTATTA TCACTCAACC CCCAGCACTC TCTAACTTTC TCTTGAGCTA CACTTGGCAG
TATGGGCCGT TTCACCCAGA GTACGTTGTT ACTTATAACA ATTTTCAGTA CGAAGACCAT
ACCGAAGAAG CCAAATGGCC TGGGCAGACC TTTCAGCTAT TTAAGCCGGT TACCGATATT
ACTCCATCAT TTTACCTAGG CTTTGATAAA AAGCTGCCAG TCGATCGCCT GGGTATCCTC
TTCGATATTC TGGAACAGCC AACTGAAGCC CAAGGTCCAG CTTTGCTTTG GGAATACTGG
GATGGTATTG CTTGGCAAGC CCTTTCCGCC GAGGATGGGA CGCAAAATCT CCGTGTCCCT
GGATTGGTGT CTTTCATTGG CCCACAGGAC AGTCAGGCGC TGGCCCGTTT TGCCGCGCCA
TTGCACTGGC TGCGCGCACG GCTTAAAGAG GATGGTCCGC CCGGAGAACC CGTTATCCAG
AGTGTTTTTC CAAACGCGGT TTGGGCAACT CAACAACAGA CGATTGTTGA TGAGCCAATG
GGAGCCAGTA CGGGTCAACT CCACCAGATT TTCTCCTTTC GCCAGATCCC TGTTCTCGCA
GGGCAACAGA TTGAAGTACG AGAGCTTGCT GGGGCACGGG CGAATGTGGA GTGGCGCCTG
ATAGCGAGGG AAATCTTGGG TAGAGAGGAG AGGGCGCTCA GTGAAGTTGA ATCGATGCTG
GCTCTTGAAG GTGCTCAAAC TGACATCGAA AAAAACAATC TTCGTCTCAG GCGGGATCGT
CGCAAGCAGG TGACCGAAGT TTGGGTGCGT TGGCAGGAGC AGCAGCATCT TCTCTTTTCG
AAGCCGAGTG ACCGCCACTA TGTGGTTGAC CGGGGGCAAG GGCAACTTTT ATTCGGCGAT
GGGGTACGCG GCAAGATTCC GCCGTCCGGT GCGGCGATTT TAGCGCGACA ATATCGCTCC
GGGGGCGGTC GTAGAGGTAA TTTACCGGCC CAGACGATAA AACAAGTAGT GGGTCCGATT
GGCGGCGTGG AGGAAGCATT TAATCCGCTC CCTAGCGAAG GCGGTGCTGA TCGTGAGAGT
CTGGAGAATT TTGCCTTTCG TGGACCACAA ACTCTCCGTC ATCGCGGACG CTCCATAGGC
TTAAAAGATT ATGAGACATT AGCCTATGAA GCCTCGGCTG CGGTGGCTTT TGCCCGCGCG
ATCCCAACCC ATAATCCAAG CGGTCGATCC ATTCCCGGTT GGGTGACTTT GCTCATTATC
CCCCAGAGTC AAGAGCCACG CCCCTGGCCC TCATTTGGGC TGCGAGAGCG GGTTCGAAAA
TATATCGAGG CGCGTGCTCC AGCCGATCTG GCCGCTGCCC ATCAGATCTA TGTTACCGGA
CCCGATTATC TACCTATAGG GGTGACGGCC ACGATCGTAC CCATTGATCC TGCTGAAGCA
GGGGCCATAG AGCAACGTGC GCAAGAGGCG TTAGAGGATT TTCTCCATCC ATTGCGCGGG
GGACCTGAAA GACGCGGCTG GGCACTGGGG CGAGATGTCT TCGTTTCCGA TGTGGCCGCG
GTAATGGAGC GGATACCGGG AGTTGATTAC GTGGAAGAAT TGGGATTGTT GCTTAGGGGG
GGGTTGCAGG GCGAGCGAAT TAGGGTGGCT GAAGATAGGA TTGTGGTGGC CGGAGAGATC
CAGCTCAAGC TGAAGGCAGG GGAGAGACAG CGCTATGCCA GTACCATTGC CAAACCTAGA
TGA
|
|---|
| Protein sequence | MIFRPGILLD DRDAAQILKA LLARRLGYVP EWEPQGPGLA LAEVFARYLQ TIIQRLNQAP
DKNKLAFLDL LGLQLIPARA ARTPIVFRLA ENAPDGRLPA GTRVAAPPPP EQTDQIIFET
ERSIGLMTAR LKEVVSLWPG RDQYIDHSAA FIAGRPLQPF KKRQLENTPH ILYLAHDTLL
ALAGKSLLNV TFELTNTSSE RLDIVWEYWD GEVWREFLAM RPACDEEEAH KLDSTDGLQY
SGRFRLQADC AETKKTMVNG VDAFWIRGQL AEPLPLDPEQ ILPEVESIQI GAEIASTSPI
EVTIEEAIDI EKAIKKVIES KKVIESPATG GLILDKAFSD ATDIDVTKPF FPLGLQPQPG
SVFYFTNAEV FSKPGARVRL YIGKTVTPSD QLVTNSTSDG LRMTTDTNNS QLPHEVSWEY
WNGRKWEVLI TYSNDPNGSS ALSKSPQDFS DSGFIDLIIP TDMAPTTINE EEGLWMRVRL
LSGGYGFKSS ISTGDSLTEF PFIITQPPAL SNFLLSYTWQ YGPFHPEYVV TYNNFQYEDH
TEEAKWPGQT FQLFKPVTDI TPSFYLGFDK KLPVDRLGIL FDILEQPTEA QGPALLWEYW
DGIAWQALSA EDGTQNLRVP GLVSFIGPQD SQALARFAAP LHWLRARLKE DGPPGEPVIQ
SVFPNAVWAT QQQTIVDEPM GASTGQLHQI FSFRQIPVLA GQQIEVRELA GARANVEWRL
IAREILGREE RALSEVESML ALEGAQTDIE KNNLRLRRDR RKQVTEVWVR WQEQQHLLFS
KPSDRHYVVD RGQGQLLFGD GVRGKIPPSG AAILARQYRS GGGRRGNLPA QTIKQVVGPI
GGVEEAFNPL PSEGGADRES LENFAFRGPQ TLRHRGRSIG LKDYETLAYE ASAAVAFARA
IPTHNPSGRS IPGWVTLLII PQSQEPRPWP SFGLRERVRK YIEARAPADL AAAHQIYVTG
PDYLPIGVTA TIVPIDPAEA GAIEQRAQEA LEDFLHPLRG GPERRGWALG RDVFVSDVAA
VMERIPGVDY VEELGLLLRG GLQGERIRVA EDRIVVAGEI QLKLKAGERQ RYASTIAKPR
|
|---|
| |