| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1833 |
|---|
| Symbol | |
|---|
| ID | 3705077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 2082240 |
|---|
| End bp | 2083322 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637738314 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_343831 |
|---|
| Protein GI | 77165306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAAACTA TCGCTTACTT TATCACCTCC CATGGTTTTG GCCATGCGGC GCGAGCCTGC
GCGGTCATGG ACGCATTACG GAAAAATCTT TCTAAAATCC AATTTGAAAT TTATACTCAG
GTTCCCCCTT GGTTCTTCCA AGGCTCCCTA CAGGGAAATT TTAATTATCA TGCCTTGCTA
ACCGATATTG GCATTGTTCA GAAATCGCCC TTACATGAAG ATTTGAAGCA CACGCTACAT
GCTCTTGACC GCTTCCTTCC TTTTAACCCC TCTCAAGTGG TTAGACTTGC CAAGCAAATC
CAAAAAAACC AATGTGAGCT TATGCTATGC GATATCTCGC CTTTGGGAAT CACAGTAGCC
AAGGAAGCAG AAATACCGGC AGTTCTCATT GAAAACTTCA CCTGGGATTG GATTTACCAA
AGTTACCTTA GCCAGCATCC AGAAATCGGC AAATATATTG ATTTTTTTAA GGGTTTATTT
GAAACAGCGG ATTATCATAT TCAAACTCAA CCAGCTTGCC ACCCCACACC GGTTGATTTA
ACCACTCCGC CCGTTTCCCG AAAAGCCAGA CTTTTTAGGC AACAAATTCG AAGCAAACTC
AGCCTGCCTC AGAATGCTCC AGTTATTTTA ATTAGCATGG GCGGCATTCC CCCAGGACAC
TACCCCTTTC TAGCGCAAAT AGCTGCCCAG CAAGCCCTGT TTTTTATCAT TCCCGGGGTG
GGTGAGAGTC TACAACGTCA TGAAAATATA GTTTTTTTAC CCCACCATTC CGAATTTTTC
CATCCGGATT TAATCCAAGC CTCGGATCTG GTATTGGGAA AGCTAGGCTA CAGTACCCTG
GCCGAAACCT ACTGGGCGGG CATCCCATTT GGCTATATCA TCCGAACCCA TTTCCGGGAA
TCAGAGATAC TCGATAAATT TGCGAAAAAA GAGATGGACG GTTTTGCCAT GAATGAAACC
CAATTTAACA GGGGCGATTG GATTTCCCAA TTACCTTATT ATCTCAATTT ACCTTCCCGG
GAGCGTTTTG GCCCTAATGG CTCTGAGCAA ATAGCTCGCT TTATTCTCTC TTTGTCACCA
TAA
|
|---|
| Protein sequence | MKTIAYFITS HGFGHAARAC AVMDALRKNL SKIQFEIYTQ VPPWFFQGSL QGNFNYHALL
TDIGIVQKSP LHEDLKHTLH ALDRFLPFNP SQVVRLAKQI QKNQCELMLC DISPLGITVA
KEAEIPAVLI ENFTWDWIYQ SYLSQHPEIG KYIDFFKGLF ETADYHIQTQ PACHPTPVDL
TTPPVSRKAR LFRQQIRSKL SLPQNAPVIL ISMGGIPPGH YPFLAQIAAQ QALFFIIPGV
GESLQRHENI VFLPHHSEFF HPDLIQASDL VLGKLGYSTL AETYWAGIPF GYIIRTHFRE
SEILDKFAKK EMDGFAMNET QFNRGDWISQ LPYYLNLPSR ERFGPNGSEQ IARFILSLSP
|
|---|
| |