| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1820 |
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| Symbol | |
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| ID | 3705260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 2063150 |
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| End bp | 2065243 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738303 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_343820 |
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| Protein GI | 77165295 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000291802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAAAA TATTTCATTC CAATAATAAG CGGCGTATTT TACCCATCGT TAATTTTTTG
CTTGTGGGGG GGATTCTTCC AGGTAGTGCA CTGGCGCAGA ACGCTCCAGA GGATGAGAGC
GTGGGGCTGG AGCAGATGGT GGTCACGGCG ACCCGTACTG AAACCCCTAT CTCCCAACTG
ACTCGTTCAG TAACTGTGGT GACCAACCAG GAAATCCAGC AACAAGCGGG CCTAGCCCGG
AATTTAGGTG ATGTCCTAGC GAAAACTGTG CCGGGCCTTG GTCCTAGCTC GGAGGCGCTG
TCCTCTTTTA GTCAGACATT ACGGGGCCGT GATTTCCTGG TGTTGATTGA TGGTATTCCC
CAGTCTACCC CCTTGCGATC ATCCAGCCGG GATCTCAACA CCATTGACGT GGACGCGATA
GAACGCATCG AAGTGATACG GGGAGGGACC GCAGCCTATG GCTTTGGCGC GGCTGGGGGG
CTTATCAATA TCATTACCAA GAAGCCTGCT AAAGAGGCTC TGGCGGGCTA TTCTCAAGCT
AGCGTCCGCG TTTCAACCGA GCACCTGGAT GATTCCGCCG CTTGGCAAAC CACCCAGCGA
GTTTCCGGCA CCAAGGATAA TATTGATTAC TTGGCTTCCG GAACCTTTAT TCAGCGCAAT
GGCTACTTCG ATGCTGATGG TGATCGCATT CCTCCCGATC CCCTCGGCAA CCAGGGTGGA
CTAGCGGATA CTAATGAATA CAATATATTA GGTAAATTCG GCTTCAATTT CGATCAAGAT
CGCCAGCGTT TGCAGTTTTT TGTTAACCAT TTCAATATCA AGCAAGACAC GGATTTTACC
TTCGCCTTCG GCGATCCGAA TCAGGGTATT AAAACACCCG CTGTGCCAGG CAGTTTCAAC
GCTGCTGATC CCGGTACTAC CAATACCCTT GCTAGCATGC ACTACATTAA CCGTGACTTG
CTGGGTAGCC ACGTTAAGCT CAATGCTTAC TATGGGGATT TGACTGCGCG TTTTTCCAAA
TTTCCTGGTT TTGCCCAGAC TGAAATTCAG TCACAGAAAT ATGGCACCCG CTTGACCATT
GATACGCCCC TGGCTGTGCG AGATTATGAT TTTAGCCTCA TTTGGGGGAT CGACTTTCTG
CGGGATGAGA CCGTTCAGGC GGGTATAGAT GGTCCCACGG TGGTTCCGAA TATGCAGGAA
AATGCTCTCG CGGGCTTTCT GGAATTGGAA TTGCCGTTGA GCGACCTTGG CCTGCTGCGA
GGGGGGTTCC GATATGAACA TATTTCAGTG GATATTGACG ATATAGTCAA TCGGGGCGGC
ACGCTTGTGC GAGGTGATAC CCTAAATTAC GGCAAACCTC TCTTCAATGC CAGCGCCGTA
TTTTATCTGA CTGATGAAAT TGAGGCATTC GGGAGTTTTT CCCAGAGCTT TTCGGTGGCA
GATATTGGTC GCGCTATCCG GGATGCGAAC TCATCCATTA CTAGCGCTGG CCAACTTGAA
TCCAATGCAC AGAAGGTCAA CAGTTACGAA ATCGGCTTGC GGGGCGGCAG AGGCCCGCTA
CAAGCTTCCG CCGCTGGTTT CTACAGCACC TCCAATAACG GGACGACTTT TAACCAGGAT
CTGAGTATCG TGAAACAGCC TGAGCGCATC TGGGGCGCTG AGGGCACTCT GGCTTACCGC
TTCAACTCTC AGTGGAATAC CGGTGGCACT GTTACCTGGG TAGCCGGTGA AGTGGATCTC
AATGATGATG ACGACTATGA AGAAGATTTG CCCAACACCC GTGTTCCACC GGTGAAATTA
ACCGGTTTCC TGGAATATAG CCCTTGGAGG TGGTGGGATA ACCGGATGCA GGTGCTGTAT
GTGGGTGATC GAAGCCCGGA TTCGACTCAA TTCGGCGGCG GTGAGGTGGA TGACTACACC
ATCGTTGATT TGATCAGCCG CTTTAAAGTG GGGCCAGGTT ATTTGGGCGT GGCGGTGAAA
AACTTGCTCA ATAACGATTA TTTCCCCCTT GTTAGTCAGG CTGGCCGCTT ACCCTATGCT
TTCTCTACAG GTCCGGGCCG CACCGTCCGC ATCAGTTATG CGCTGAATTG GTAG
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| Protein sequence | MPKIFHSNNK RRILPIVNFL LVGGILPGSA LAQNAPEDES VGLEQMVVTA TRTETPISQL
TRSVTVVTNQ EIQQQAGLAR NLGDVLAKTV PGLGPSSEAL SSFSQTLRGR DFLVLIDGIP
QSTPLRSSSR DLNTIDVDAI ERIEVIRGGT AAYGFGAAGG LINIITKKPA KEALAGYSQA
SVRVSTEHLD DSAAWQTTQR VSGTKDNIDY LASGTFIQRN GYFDADGDRI PPDPLGNQGG
LADTNEYNIL GKFGFNFDQD RQRLQFFVNH FNIKQDTDFT FAFGDPNQGI KTPAVPGSFN
AADPGTTNTL ASMHYINRDL LGSHVKLNAY YGDLTARFSK FPGFAQTEIQ SQKYGTRLTI
DTPLAVRDYD FSLIWGIDFL RDETVQAGID GPTVVPNMQE NALAGFLELE LPLSDLGLLR
GGFRYEHISV DIDDIVNRGG TLVRGDTLNY GKPLFNASAV FYLTDEIEAF GSFSQSFSVA
DIGRAIRDAN SSITSAGQLE SNAQKVNSYE IGLRGGRGPL QASAAGFYST SNNGTTFNQD
LSIVKQPERI WGAEGTLAYR FNSQWNTGGT VTWVAGEVDL NDDDDYEEDL PNTRVPPVKL
TGFLEYSPWR WWDNRMQVLY VGDRSPDSTQ FGGGEVDDYT IVDLISRFKV GPGYLGVAVK
NLLNNDYFPL VSQAGRLPYA FSTGPGRTVR ISYALNW
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