Gene Noc_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1812 
Symbol 
ID3705252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp2052049 
End bp2053785 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content34% 
IMG OID637738295 
Productsiderophore synthetase component, IucA/IucC 
Protein accessionYP_343812 
Protein GI77165287 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4264] Siderophore synthetase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTGGG AAATAGCCAA TAGGAATCTT ATTGCTAAAG CCATAAGTGA ACTTTATTTT 
GAGGAGATCA TTTCTCAGGA AGTACGGGAA ATAAAAAAGG GATTATATGC GTTAAAAATA
GAGGAAAATT TAACTTACAT TTTTGAGGCA TATAAAAGTG TCTGGTGCCA CCTTGTTATA
GATGAAAGAT CATTAAAGAG AAGTGATGGT TTAGAACTTG ATGCTGCAAA TTTTTTTAAG
GAAACACAGC ATCTTACAAA AATGAATGAT ATTACCTTAG CTAATTTTAT GGAAGAAATG
CTACATACGC TTTATAGCGA TCAAACTATT TTGAAAAAGA AAATATCTTC CCAGGAAATG
TCCCAACTTG GTTTCTTAGA GGTGGAAAGT TATCTGGATG GGCATCCAAA AATTATTTTA
AACAAGGGAA GAATAGGCTG GTCTCCAGAC GATCTCTCCA TGTTCTCGCC AGAGCATGCT
AAAGAAATCC AATTCTACCG GGTAGCTATC AAAAAGAATT TAGTTACGGT AAATCACCAA
AAAGAAAAAT TTTTTAGTGA GATTATTTAC GCTGATCTTG AAAAACGGGA AATTAATTTA
TTAAAAGAAA AATTAGCGAA TAAAAAATAT AACGCCGAAT CTTATTACAT TATTCCCATA
CATCCTTGGC AGTGGGAAAA TAGAATAAAA ATCTTCTTCC AGAAAGATAT CAGCAAAAAT
AATATAATTT TTTTATCTAG TGCCGGCGAT AGCTATAAAC CCTATATATC CCTAAGAACG
TTTTCTAATT GCAGCAATCC ATACCTTTGT GACGTTAAAC TGCCCATTTC AATTTTAAAT
ACTTCTTGTA TACGAGGAAT ACCTGCTCGC TATATTTCTA TTGCTTCGGA AATATCGGAA
GGCGTTGAAG CTATTATTAA GCAGGATGAT TGTTTATTCA ATGCTAATGT GGATTGCTTA
AAGGATATTG CAGCTTTTAG TTATGTGGAG CCTTCCTATA AGAATATCCC AGGTGCTCCT
TATCAATATA AAGAATTCCT TGGGGCAGTA TGGAGAGAAT CGAGTGTAAC CAAGCTTAAA
AGCAATGAGA AATGCTTGAT GACAGGCGCG CTTTCTTATT TGGACGGGAA TAAAAAATCG
TTGATTGGTT GCTTAATAGA AAATTCTTCT CTAACCATTG ATGAATGGCT GGAAGAATAT
TTTAAAAAAG TTGTTATTCC CCTTTATCAC CTTCAGTCTC ACTATGGAAT TGGCTTGGTT
GCACATGGTC AAAATACCAT ACTAAAGCTA AATAATAATG CCCCTTCAGG CTTAATTATT
AAGGATTTTC ATGGTGACTT ACGTTTAAAT AAAAATTTTC CAGCGGAAAC AAGGAAATAT
TTTTCCGATA AAACGATTGA AAAATTAGAT ATTTTACCCT CTGATCATAT TATCTACGAT
CTTATCACGG GGCATTTTAT TTCAGTTCTT AGATTTATTT CGCAGGCGCT TTTTCTCTCT
CATGGCTATA AGGAAAAAAA ATTCTATAGT GTATTAGGCA CGATAATTCA TGATTATGAA
AAAAAATACC CAACAAGATC AAAGACTCCA AGCCTATTGA CGCCCAATTA TCATCGTGTT
CTTTTAAATA AGGTCCGCTT TATCATTGGC TATCAAGATA CGGCCCAGAG ACCTAAACCA
CAGCTTGGAA ATCCCCTGCT AAATCCGCTG ATAGAAAAAG ATTATCTTTA TGCGTGA
 
Protein sequence
MSWEIANRNL IAKAISELYF EEIISQEVRE IKKGLYALKI EENLTYIFEA YKSVWCHLVI 
DERSLKRSDG LELDAANFFK ETQHLTKMND ITLANFMEEM LHTLYSDQTI LKKKISSQEM
SQLGFLEVES YLDGHPKIIL NKGRIGWSPD DLSMFSPEHA KEIQFYRVAI KKNLVTVNHQ
KEKFFSEIIY ADLEKREINL LKEKLANKKY NAESYYIIPI HPWQWENRIK IFFQKDISKN
NIIFLSSAGD SYKPYISLRT FSNCSNPYLC DVKLPISILN TSCIRGIPAR YISIASEISE
GVEAIIKQDD CLFNANVDCL KDIAAFSYVE PSYKNIPGAP YQYKEFLGAV WRESSVTKLK
SNEKCLMTGA LSYLDGNKKS LIGCLIENSS LTIDEWLEEY FKKVVIPLYH LQSHYGIGLV
AHGQNTILKL NNNAPSGLII KDFHGDLRLN KNFPAETRKY FSDKTIEKLD ILPSDHIIYD
LITGHFISVL RFISQALFLS HGYKEKKFYS VLGTIIHDYE KKYPTRSKTP SLLTPNYHRV
LLNKVRFIIG YQDTAQRPKP QLGNPLLNPL IEKDYLYA