| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1768 |
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| Symbol | |
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| ID | 3704785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1990694 |
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| End bp | 1992943 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637738251 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_343770 |
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| Protein GI | 77165245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.520524 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTATA ATGGATATTT CATGAGCATG TTAGGAGGCC CCTTGGTATT TTCTCTCGTG
CGCTGGTTGG GAGTCTTCGC TTTGCCGTGG TTGACGGCTT GTAGCGGAGA AGTATTGAAC
AGTCCTTATC CTGCCGCCGG CAAGGTCCAA AATGTCGCCT ATTCAAGCTT CAATTTACGC
CCTAAGACCC TGGACCCGGC TCGTTCCTAT AGTGCTAATG AAATAGTCTT TACTGGCCAG
ATTTATGAGC CTCCCCTGCA ATATCATTAT CTCTTGCGCC CCTACAGCCT GGAGCCTCTG
ACCGCTCAAG CCATGCCCCA GGTGACTTAC GTGGACGCCG CCGGCAATCC TCTTCCCCCA
GAAGCCCCGT TTAGAGAGGT AGCCTATAGC ATTTATGAAA TTCAGATTCA GCCAGGCATT
CATTATCAAC CCCATCCCGC ATTTGCCAAG GATGAAACGG GCCGGTTTCT CTATCATGAG
CTAAGCCCTG GAGAGTTGGC TGGAATCTAT AAGCTTAGCG ATTTTCCCCA TAGGGGTAGC
CGGGAATTGG TAGCGGCCGA TTATGTTTAC CAAATCAAAC GCCTGGCTTC CCCCTGGGTG
CATTCCCCCA TTTTGGGCCT GATGAGCCGT TATATCGTGG GAATGAAGAC CTATACCCAA
ACTTTGGTGG CGGCTCAAGA GAAGGACAAG GGAAACTATT TAGATCTTCG CGCTTACCCT
CTTCGGGGAG CGGAAGTGGT GGACCGCTAT ACTTATCGCT TGACCATCGA AGGTAAATAT
CCCCAACTGC GCTACTGGCT GGCCATGCCT TTTTTTGCTC CGGTGCCCTG GGAGGCGGAT
CGGTTTTATG CTCAGTCAGG CATGGCGGAA CGCAATTTGA ACCTTGATTG GTATCCTGTC
GGCACGGGTC CCTATATGCT CACGGAAAAT GACCCTAACC GCCGCATGGT GCTGGAGCGT
AATCCGAACT TCCATGGCGA GACTTATCCT GCTCAGGGGA TGCCAGGCGA TAAAGCGGCT
GGTCTCCTGG TGGACGGGGG CGAGTCCTTG CCTTTCATCG ATCGGGTCGT GTTTAGCCTG
GAAAAGGAGA GTATCCCCTA TTGGAATAAA TTCTTGCAAG GCTACTACGA TACGTCCGCA
GTCACCTCGG ATAGTTTTGA TCAGGCTTTA CGTATTGCTG GAGGAGGAGA AGAGCTGACT
TTGACTGAGG AGATGAAAAC CAAGGGGATC AAGCTGGTTA CGGCTATCGG GACTTCCATC
TCTTATCTGG GTTTTAATAT GCTGGACCCG ATAGTCGGGG GCGATAGCGA GCGGGCACGT
AAACTGCGCC AGGCCATTTC CATTGCCATT GACTATGAGG AGTTTATTTC CATTTTTGCT
AATAGCCAGG GGATTGCCGC CCAGGGACCT TTACCGCCCG GGATTTTTGG CCACCAAAGT
GGTAAAGAGG GTATTAATCC CCATGTTTAT AACTGGAAGA ACGGACAGCC TCGCCGCAAG
TCTCTCCAGA CAGCCCGCCG GCTCTTGATT GAGGCCGGTT ATCCGAATGG CCGGGACGCC
GAGAGCGGCA AACCTCTTTT ATTATATTTC GATACCACGG GTAAGGGCCC GGACAGTGCG
TCTTTAGTAA GTTGGATGCG GAAGCAATTC CAAAAGTTGA ATATCCAATT AGTTGTGCGC
GAGACTGATT ACAACCGCTT TCAAGATAAA ATGCGTCAGG GAAATGCCCA GATTTTTCAA
TGGGGATGGA CTGCTGATTA TCCCGATCCA GAAAACTTTC TCTTTTTGCT CTATGGGCCG
GAGGGCAAAG TTCGCCATGG GGGGGAGAAT GCGGCCAACT ACAGCAATCC TGAGTTTAAC
CGGCTTTTTC AAGAAATGAA AAGCATGGAA AATGGCCCGG AGCGCCTGAC CAAGATTTGG
AAGATGGTGG CTATTGTTCG CCGGGATGCC CCTTGGGTAT GGGGGTTTCA TCCTAAGGAG
GTGAGCTTGC TCCATGCCTG GAATTTCAAT GTCCAGCCTA ATTTAATGGC TAATAATACC
CTCAAATACC GCCGCATTGA TCCTCAACTG CGGGCGCGGC TGCGGAAGGA ATGGAATCGT
CCCTTGCTCT GGCCCCTGGG GGCACTGTTA GCCGTCCTTG TTCTGGGAGC AGCGCCTGCA
GTGGTCACCT ACTGGCGCAA AGAGTATCGG CCGGGCTGGG CAGTGGTGCC AGGAGAAGGC
AGAGGAAGTC AGAGAAAAGT GCCTGGATAA
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| Protein sequence | MNYNGYFMSM LGGPLVFSLV RWLGVFALPW LTACSGEVLN SPYPAAGKVQ NVAYSSFNLR
PKTLDPARSY SANEIVFTGQ IYEPPLQYHY LLRPYSLEPL TAQAMPQVTY VDAAGNPLPP
EAPFREVAYS IYEIQIQPGI HYQPHPAFAK DETGRFLYHE LSPGELAGIY KLSDFPHRGS
RELVAADYVY QIKRLASPWV HSPILGLMSR YIVGMKTYTQ TLVAAQEKDK GNYLDLRAYP
LRGAEVVDRY TYRLTIEGKY PQLRYWLAMP FFAPVPWEAD RFYAQSGMAE RNLNLDWYPV
GTGPYMLTEN DPNRRMVLER NPNFHGETYP AQGMPGDKAA GLLVDGGESL PFIDRVVFSL
EKESIPYWNK FLQGYYDTSA VTSDSFDQAL RIAGGGEELT LTEEMKTKGI KLVTAIGTSI
SYLGFNMLDP IVGGDSERAR KLRQAISIAI DYEEFISIFA NSQGIAAQGP LPPGIFGHQS
GKEGINPHVY NWKNGQPRRK SLQTARRLLI EAGYPNGRDA ESGKPLLLYF DTTGKGPDSA
SLVSWMRKQF QKLNIQLVVR ETDYNRFQDK MRQGNAQIFQ WGWTADYPDP ENFLFLLYGP
EGKVRHGGEN AANYSNPEFN RLFQEMKSME NGPERLTKIW KMVAIVRRDA PWVWGFHPKE
VSLLHAWNFN VQPNLMANNT LKYRRIDPQL RARLRKEWNR PLLWPLGALL AVLVLGAAPA
VVTYWRKEYR PGWAVVPGEG RGSQRKVPG
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