Gene Noc_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1726 
Symbol 
ID3705043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1932836 
End bp1933777 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content54% 
IMG OID637738209 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_343728 
Protein GI77165203 
COG category[R] General function prediction only 
COG ID[COG4589] Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTGGC TTGATATTCA CCCGGCCGCT CTGCAAGCTC TGGGCGGCAT CCTGGGTGTG 
CTCGCAATCG CCAACTTGAT CGTATTCATC ATTCGCGGCC GATTGAGCAA GTCATTGCAT
CATGAACTCG TAAGCCGTAT CCAGTCCTGG TGGCTGATGT TCGCCGTTTT CGCCATCGCC
ATGGCGATTA ATCGCACGGG ATCACTGATA TTCTTTGCCT TTGTTTCCTT CATGGCGCTC
AAGGAGTATC TGTCATTGAT CCCTTCGCGG CGAGCAGATC GCCGGGTAAT GTTTTGGGCC
TATCTGACCA TTCCCGCCCA GTATTTATTA GTGGGTTACA AATGGTACGG AATGTTCATT
ATTTTAATTC CAGTCTATGC TTTTTTACTG CTGCCCATGC GCATGGTATT GGTTGGCGAA
ACGCGCAACT TCTTACGCGC TGCGGGTACC CTGCATTGGG GTGTAATGGC AATGGTGTTC
AGCATCAGCC ACGTGGCGTA TTTACTGGTG CTGCCAGAGC AAGTCAATCC TGCCGCCGGT
GGTGCGGGCC TCGTGCTTTA TCTCGTGTTT CTGACCCAGT TCAATGATGT TGCGCAGTAT
TGCTGGGGTA AGCTGCTGGG CCGCCGCAAG ATTCTGCCCA GCGTGAGCCC AGGCAAGACC
GTCGAGGGCC TGATTGGGGG CATAGCGACT ACCATAGTCT TGTCCTGGTC ACTAGCCTCC
TGGCTAACAC CCCTGAATGT TCCCCAGTCG GTAGCTGCAG GTGCGTTGAT CGGCATAGCT
GGCTTCGTCG GCGATGTCAC CATATCCGCC CTCAAACGCG ACCTAGGTGT GAAGGACTCA
GGCAGCTTAC TGCCAGGCCA CGGAGGCATA CTGGACCGCA TCGACAGTCT GATTTATACG
GCACCGCTAT TTTTCCACTT CATCTACTAC CTGCACGGCT AA
 
Protein sequence
MDWLDIHPAA LQALGGILGV LAIANLIVFI IRGRLSKSLH HELVSRIQSW WLMFAVFAIA 
MAINRTGSLI FFAFVSFMAL KEYLSLIPSR RADRRVMFWA YLTIPAQYLL VGYKWYGMFI
ILIPVYAFLL LPMRMVLVGE TRNFLRAAGT LHWGVMAMVF SISHVAYLLV LPEQVNPAAG
GAGLVLYLVF LTQFNDVAQY CWGKLLGRRK ILPSVSPGKT VEGLIGGIAT TIVLSWSLAS
WLTPLNVPQS VAAGALIGIA GFVGDVTISA LKRDLGVKDS GSLLPGHGGI LDRIDSLIYT
APLFFHFIYY LHG