Gene Noc_1725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1725 
Symbol 
ID3705042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1932225 
End bp1932836 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content56% 
IMG OID637738208 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_343727 
Protein GI77165202 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGCA TTTATCTCTT GAAACCTGTT TTCCAAAAGA TGTTAAGGCC GGTGGTCAAG 
CTGCTAGCCA GGGCGGGCGT AACAGCTAAC GTAGTTACTC TCACCGCAGC GGCACTATCG 
TTCACCGTCG GCGCCTGCAT CGCCCTGTGG CCATACGCAA CCTGGCCAAT GTTGTTACTA 
CCCGGCTTTC TGTTTTTGCG TATGGCGCTC AACGCTATCG ACGGTATGCT AGCTCGCGAG 
TATCACCAAG CATCTGCATC CGGGGCGATT CTCAACGAGC TCGGCGACGT GCTCTCCGAT 
GCCGTGCTCT ATTTGCCATT AGCGCTGGTC AGCGTATTTA ACGCAGCCTG GATGGTCGTC 
ATCGTCGTGC TGGCCGTGAT CACTGAGATG GCCGGCGTAG TTGCGGTCCA AGTGGGTTCC 
AAGCGGCGTT ATGACGGTCC CATGGGAAAA AGTGACCGCG CTCTGGTCTT TGGCGTACTC 
GGTCTGTGGT TGGGATTGGG CGGGCCAGCC GGGTGCTGGA TTATTTATTT GCAAATAGCA 
GTAACTGTAT TGATGGTTGT TACCATCTAT CGGCGCGCCC GCGGCGCCCT GGCCGAAGCC 
GAGTCAACCT GA
 
Protein sequence
MASIYLLKPV FQKMLRPVVK LLARAGVTAN VVTLTAAALS FTVGACIALW PYATWPMLLL 
PGFLFLRMAL NAIDGMLARE YHQASASGAI LNELGDVLSD AVLYLPLALV SVFNAAWMVV 
IVVLAVITEM AGVVAVQVGS KRRYDGPMGK SDRALVFGVL GLWLGLGGPA GCWIIYLQIA 
VTVLMVVTIY RRARGALAEA EST