Gene Noc_1607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1607 
Symbol 
ID3705730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1794303 
End bp1794815 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID637738083 
ProductSulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_343612 
Protein GI77165087 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.180484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAA ATAAAATTTT GCATGCTGTT CATGATGGGG TCCATGTGCT GCGCCTTTTA 
GGCGATATGC GTTATCCTCT AAGCCCCTCA TTAGATCATT TTTTGCAACG TTTATTTTCT
GAGGTAACGC CCCAGGGTTT TGTGGTCGAT CTGACGGACA CCCGGAGTAT AGATAGTACT
AACTTGGGGT TGTTGGTGCG TATTGCCAAG CTTATGCAGC GCCGTGGCCA GCCTAGGGTT
ACCATCATTT CCAATCGGGA GGAAATTAAC GAAGTATTGA CTTGTCTAGG CTTTGATAAA
GTATTTAATA TTGTCGCCCA TGGCGGTGGC GAACCGTTAG CCGGGAAAGC ACTGGCCTTG
GAAGAAGCAA ATGACGTTGC CATGTTGGAT ACACTTTTGA AAGCTCACCA AACCCTAATG
AATCTTAATG AGCAGAACAA GGATTTGTTC CGCGATGTGG TCGCGATGTT AGAAAAAGAA
CAGGCGGATA AATCTTCTGC TCCCAACGCG TGA
 
Protein sequence
MAENKILHAV HDGVHVLRLL GDMRYPLSPS LDHFLQRLFS EVTPQGFVVD LTDTRSIDST 
NLGLLVRIAK LMQRRGQPRV TIISNREEIN EVLTCLGFDK VFNIVAHGGG EPLAGKALAL
EEANDVAMLD TLLKAHQTLM NLNEQNKDLF RDVVAMLEKE QADKSSAPNA