Gene Noc_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1566 
Symbol 
ID3705785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1742495 
End bp1742980 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content39% 
IMG OID637738047 
Producthypothetical protein 
Protein accessionYP_343576 
Protein GI77165051 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTGAAAA TGAGTTGGGC TGAGATCTGT CAAGATCCTA CGCTAAGGGA CCTTCCTTAT 
AAAATTCAGA CCGACAAATG GGGAAACATT GTAATGAGTC CTGCCACTAA TGAGCACGGG
ATTTATCAAG CCAAAATTGT TGCCTTACTT AGCAAGTTAA TGAATGAGGG TACGATAATT
TCAGAGTGTT CCGTTCAAAC TAGCGAAGGA ATAAAAGTGG CGGATGTGGC TTGGGCTTCA
GAGAAATTCA TGCAAAATAA TAGAGGTAAG AGTCCATTTG ATGAAGCACC TGAAATATGC
GTAGAGATAT TGTCACCCTC AAATACCAAA ATGGAGATGG AAGAAAAAAA GGAATTATAT
TTTGCTAGAG GAGCTAAGGA ATTCTGGATG TGTGATAAAA AGGGAAGTAT CAGTTTTTAC
AAAAACACAG GTCCATTAGA ACACAGTAAT ATCATAGAAG GGTTTCCTGG CACGTTATCA
GTTTAG
 
Protein sequence
MVKMSWAEIC QDPTLRDLPY KIQTDKWGNI VMSPATNEHG IYQAKIVALL SKLMNEGTII 
SECSVQTSEG IKVADVAWAS EKFMQNNRGK SPFDEAPEIC VEILSPSNTK MEMEEKKELY
FARGAKEFWM CDKKGSISFY KNTGPLEHSN IIEGFPGTLS V