Gene Noc_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1557 
Symbol 
ID3705815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1731463 
End bp1731861 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content48% 
IMG OID637738041 
Producthypothetical protein 
Protein accessionYP_343570 
Protein GI77165045 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.406104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGGG AGCTTTCAGA CCAGCAGCGC CGGGAATTTA AACAACAGCT ACAGCAACGA 
TTTGATGAAG TATCGGAGAA GGTACGCCAG GAACTCCGGG AGAGCGATAA TCAATCCTAT
ATCGAACTCG CAGGTAGAGT ACATGATCGA GAAGATGCCT CCCTTGCCGA TCTGCTAATA
GATATCGACC TTGCCATAGT GGACCTTCAC ATTGAGGAAA TTCGGAATAT TGAACAGGCC
CTGATGCGCT TTCCCAAGGG GAATTATGGC ATCTGTATCG ATTGCAACAC GGACATAGAC
TATCAGCGCC TGCAAATTAA CCCGACAGTA AAGCGCTGTT TTGATTGTCA AACGAGGCAT
GAACGCACCC ATAGGGAAAA AGCCCACCCC ACCCTATGA
 
Protein sequence
MTRELSDQQR REFKQQLQQR FDEVSEKVRQ ELRESDNQSY IELAGRVHDR EDASLADLLI 
DIDLAIVDLH IEEIRNIEQA LMRFPKGNYG ICIDCNTDID YQRLQINPTV KRCFDCQTRH
ERTHREKAHP TL