Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1547 |
Symbol | |
ID | 3705805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1716918 |
End bp | 1718261 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637738032 |
Product | major facilitator transporter |
Protein accession | YP_343561 |
Protein GI | 77165036 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCATG AGCTACAATC TATTTCTTCA TTGCTTTTTG GTATTGCCAT TGTACTATTG GGTTCGGGCC TATTAGGCAC CTTAGTGGGG GTGCAAGCCA ATCAGGAGCA ATTCAGTTCC ACGGTTATTG GTTTTATCCA ATCTGCCTTT TTTCTGGGCT ATGTGCTAGG AACCTTCCTT TGTCCCCTTC TAATCAAGCG CGTAGGGCAT ATCCGCGTTT TTGCCACCAT GGCCGCGTTA GGGTCGGCAA CAGCGATGGG CTTTGCACTT TGGGTCCATC CTCTCTGGTG GGTTCTATTG CGGATGGTTT TGGGAATTTC GGTAGTAGGG CTTTATATGG TGGTTGAAAG CTGGCTCAAT GAGCAGTCTT CCCACCATAG CCGGGGCCGG GTGTTCGCCA TTTACATGAG CATTACGTTG ATGGCCTTGG GGTTTAGTCA GTTTCTTCTT TTAATAGAGG ATAATCATGG CTTTATCCGT TTTGCCTTGA CCGCCGTGTT GTTTTCCCTA GCCCTGATTC CGGTTGCGTT GACCCAGACG CTGGAACCAA AACCGATCTC CGCGCCACGC TCGAATCTTA AAGAACTTTA TTTAGTCTCG CCCCTAGGGG TTGTGGGAGC TTTGGTGGCC GGCCTTGCCA GTGGCGCCTT TTGGGGGATG GGAGCAGTGT TTGCCCAGAA TATTGGTCTC TCGGTCTCCA GTACCTCCGT GTTTATGAGC ACAGTTATCT TTGGAGGCGC CCTGCTACTA TGGCCGGTGG GCTATTTATC GGATCGTTGG GATCGGCGCA GAGTGCTCAT CATGGTTAGC TTTACCAGTG TGGCTAGCGT GTTGGGCGCC GCCCTTGTTT TAGATGCTTC AACGCCGATG CTGCTGTTGC TTGCCTTTCT TTACGGGGGG GTTTCTTTTT CCGTTTATGC CCTGGCCGTG GCTCACTTAA ACGATCACCT TAAGCCTGGG GAAGTACTAG AAGCGACTCG GGGGATTCTG TTAGTTTATG GGGCTGGTTC CGCTCTGGGG CCCTTGATTG CTGGTTTTTG CATGGCGGTT TGGGGTCCCT CCGGTTTACT AGACTATTTA GCGGCTATTT TGGCGTTGCT CGGGCTGTTT GGCCTTTACC GCACCCAGCG GAGTGCTCCC ATACCGGCTG AAGAACAGGG GGAATTCGTT CCCATGATAC GAACTTCTCA AGCTGTCCTT GAAATGTATC CAGAGGCCGA TCTGGAGCCA GAATTGGACT TAGCGTTGAG TACTGATTTT GAGGAAGAAG CAGAGCCTGA ATCCCCGCCG GATTCTTTTA GCATGGACTG GGACTCTCCG GATTATGAGC AAGAGAGAAA ATAG
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Protein sequence | MQHELQSISS LLFGIAIVLL GSGLLGTLVG VQANQEQFSS TVIGFIQSAF FLGYVLGTFL CPLLIKRVGH IRVFATMAAL GSATAMGFAL WVHPLWWVLL RMVLGISVVG LYMVVESWLN EQSSHHSRGR VFAIYMSITL MALGFSQFLL LIEDNHGFIR FALTAVLFSL ALIPVALTQT LEPKPISAPR SNLKELYLVS PLGVVGALVA GLASGAFWGM GAVFAQNIGL SVSSTSVFMS TVIFGGALLL WPVGYLSDRW DRRRVLIMVS FTSVASVLGA ALVLDASTPM LLLLAFLYGG VSFSVYALAV AHLNDHLKPG EVLEATRGIL LVYGAGSALG PLIAGFCMAV WGPSGLLDYL AAILALLGLF GLYRTQRSAP IPAEEQGEFV PMIRTSQAVL EMYPEADLEP ELDLALSTDF EEEAEPESPP DSFSMDWDSP DYEQERK
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