| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1541 |
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| Symbol | |
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| ID | 3705838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1710395 |
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| End bp | 1711855 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637738026 |
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| Product | Outer membrane efflux protein |
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| Protein accession | YP_343555 |
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| Protein GI | 77165030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA GCCATTCCCC CAGAGCGTGT AACCGCCTAC CGGTTTTAGG AATAATAGCC
CTTGCTTTGC TATTCATATT CACCAGTTGC GCAAGTCATA ACCTCCCTTC CCTGGGGGGA
CAGCCAGGAC AAGGCGCACT TTTTGAACCT GAAAACGGGA CCATTGCCGC CTCGCCTGAG
CAGACCGGGG AAGGGAAGCC ATTGTTTGGC GGCGTCTCAT CCCCCGAGCC TGTGCTAACA
GAGGGAGAAG CGCTTTCCTT GAGCAAGTTA GAGGCCCTCG CGCGGCAACA CAATCCTACT
TTGGCCCAGG CCAAAGCCCA GATCCAGTCA GAACATGCCA AGGCCCTGGA AGCGGGGCTT
TATCCCAATC CGGTCATAGG ATATATCGGT GAGCAAATCA GCGTGCGGGG AACCGTGGGT
GAATTTCAAG GGGGATTTAT CCGCCAGAAA ATCGTCACGG CGGGGAAGCT GCGCTTGAGC
CGTGAGAAAT ACCAAGCCCG CGCTTCTGCC GCGGAGCTTC TTGCCCTGGC CCAGATGTAC
CGGGTGATTA ACGCGGTGCG TATGCAGTTT TACCGGACCT TGGGCGCCGA GCGTAAGCTT
GAGGTTCAAC AAGAGCTGCT AGAGACGGCG GAAGATAGGC AGGTGACGGT GCAGGAGATG
TTCAACGTGG GACAGGCCAA TCGGGCCGAT CTTCACCAGA CACGGGTTCT ACGCCAGGCG
CAGCTACTCA ATGTGCAGCA GGCGGAGAAT GATTTGGCCA TGGAGCGGGA AACTCTGGGA
GCGATTATTG GTTTGTTGCA ACCCCTGGGG GAGGTGACGG GGAAGTTGGA AGCTCCTTTG
CGGCACCTGG TGTGGGAAGA GGCTCTGGAG CGGCTATTGG CGGAGAGCCC AGAGCTGGCC
GCAGCCCATG CCAATCTTAA AGCCGATGAA ATTATGGTGC AGCGGGAAAA AGTGGAACCT
ATTCCCAATC TATTTATTGA AGGCTCTGCC GGCCGAAACT TTGAGGCTTC CGAGACCGTC
TATGGGGTGA GGGCTTTTGT GGAAGTACCC CTTTTTGATT GGAATCAAGG CACCATTCGG
CAGGCTAAAG CAGATTGGCG ACGCCAGCGC AATGAGGTGC GCCGGACGGA ACTCAGCTTG
CGCCAATCCT TGGCCGACTG GTTTCGCCGT TTTCGCACCG CGCTGCAAAA GGTCACGGAG
TATCAAAATG TCATTTTGCC CCAATCGGAG CAGCGCTATG TCACGCGCCT TAAAAGCTAT
CGGGCGGATC GGGAAACCTG GCCGGGGGTG TTGGAAGCAC AGCAAGACTT TTTTCATCGT
GGCCTGATTT ATATTGACCA ACTGGTAGCT TGGCGGCAAG CCCAGGTGGC GATTGATGGC
TTTCTCTTGG TAGGGGGGCT GGAGCCGCCA GCGGGTGTGG TGCCTCCCGG TCACATTGAT
TCGGTACCTA AACCCCGTTA A
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| Protein sequence | MKISHSPRAC NRLPVLGIIA LALLFIFTSC ASHNLPSLGG QPGQGALFEP ENGTIAASPE
QTGEGKPLFG GVSSPEPVLT EGEALSLSKL EALARQHNPT LAQAKAQIQS EHAKALEAGL
YPNPVIGYIG EQISVRGTVG EFQGGFIRQK IVTAGKLRLS REKYQARASA AELLALAQMY
RVINAVRMQF YRTLGAERKL EVQQELLETA EDRQVTVQEM FNVGQANRAD LHQTRVLRQA
QLLNVQQAEN DLAMERETLG AIIGLLQPLG EVTGKLEAPL RHLVWEEALE RLLAESPELA
AAHANLKADE IMVQREKVEP IPNLFIEGSA GRNFEASETV YGVRAFVEVP LFDWNQGTIR
QAKADWRRQR NEVRRTELSL RQSLADWFRR FRTALQKVTE YQNVILPQSE QRYVTRLKSY
RADRETWPGV LEAQQDFFHR GLIYIDQLVA WRQAQVAIDG FLLVGGLEPP AGVVPPGHID
SVPKPR
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