| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1504 |
|---|
| Symbol | |
|---|
| ID | 3705840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1668281 |
|---|
| End bp | 1669333 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637737991 |
|---|
| Product | putative transposase |
|---|
| Protein accession | YP_343520 |
|---|
| Protein GI | 77164995 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5464] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCC ATGATGCTTC CTATAAAAGG CTGTTTTCCC ACCCCGAGAT GGTAAGAGAT
CTGCTGCAAG GTTTTGTGCG GGAACCCTGG GTTCAGCAGC TGGATTTTTC TACCCTGGAG
AAAGTCAGCG GCAGCTACGT GACGGATGAT TTAAGGGAGC GGGAAGACGA TATTATCTGG
CGCCTCCGCC ATCAGGAGGG TTGGATGTAT ATCTACCTGT TGCTGGAGTT CCAATCCACG
GTAGACCCCT ATATGGCGGT AAGAGTGCTG GCCTATGTGG GTTTACTCTA TCAGGACCTG
ATTAAAGCTC GGTATATCGC GCCCAATCAG AAATTGCCGC CGGTCTTTCC ATTGGTACTT
TACAACGGTG GCCCGCGCTG GAGGGCGGCG ACGGAGGTCG GTGACCTGAT AACGCCGTTA
GAGGGCGGGT TGGAACGTTA CCGTCCTAGT CTACGCTATC TTTTAGTCGA CGAAGGCGAT
TACCAGGACG AAGCGCTCGC GCCATTGAAA AACCTGGTTG CGAGTTTATT TCGCTTAGAG
AACAGCCGGA CCCCGGAGGA GCTCTTACAG GTTTTGCGGA ACTTGCTACA ATGGTTACAA
AGCCCGGCGC AGAAGGGGCT GGAGCGTGAT TTTACGCTCT GGCTGAAGCG GGTGTTATTA
CCGGCCCGTC TGCCCGGTGT GGAAATTCCT TCCGTTGCCA GCTTAGAGGA GATGAACAGC
ATGTTAGCCG AACGCGTGGT GGAATGGACC CAGCAGTGGA AGCAAGAAGG TATTCAAGAG
GGTATTCAGC AGGGTATTCA AGAGGGTATT CAGCAGGGTA TTCAAGAGGG CATTCAGCAG
GGTATTCAAG AGGGCATTCA GCAGGGTATT CAAGAAGGTA TTCAGCAAGG CGAAACCCAA
GTTTTGCGCC GACTGCTTGC TCGCCGTTTT GGTCCTTTGC CCGAGTGGGT GGAAGCTCGT
CTCCAAGCAG CGGATACCGC TGCCCTGGAA GAATGGGCCG AGCGGGTGTT GGAGGCAGCG
ACTTTGGATG GGGTCTTTCA AGAAAAACCC TAA
|
|---|
| Protein sequence | MAAHDASYKR LFSHPEMVRD LLQGFVREPW VQQLDFSTLE KVSGSYVTDD LREREDDIIW
RLRHQEGWMY IYLLLEFQST VDPYMAVRVL AYVGLLYQDL IKARYIAPNQ KLPPVFPLVL
YNGGPRWRAA TEVGDLITPL EGGLERYRPS LRYLLVDEGD YQDEALAPLK NLVASLFRLE
NSRTPEELLQ VLRNLLQWLQ SPAQKGLERD FTLWLKRVLL PARLPGVEIP SVASLEEMNS
MLAERVVEWT QQWKQEGIQE GIQQGIQEGI QQGIQEGIQQ GIQEGIQQGI QEGIQQGETQ
VLRRLLARRF GPLPEWVEAR LQAADTAALE EWAERVLEAA TLDGVFQEKP
|
|---|
| |