Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1501 |
Symbol | |
ID | 3705992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1664860 |
End bp | 1666053 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637737988 |
Product | transposase |
Protein accession | YP_343517 |
Protein GI | 77164992 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.915709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAAAG CCACAAAGAT ACGCCTCTAC CCTACGAGGG AGCAGGCGGA GTTTCTGAAC CGCCAGTTCG GTAGCGTGCG GTTTTGCTAT AACACCGGCC TTCGCATTAT GTCTCACCGC TATAAGCGAC ACGGCCAATC CTTGAGCGCC AAGTATGACA TCAAGAAATT GTTGCCTGTG GCCAAGAAGT CCCGTAAGTA TGGATGGTTG AAGGAGGCGG ATTCGGTTGC GCTCGCTCAA GCGTGTATCA ATCTCGACAA GGCGTTTCAG CGTTTTTTCA AGGAAAAGAA AGGCTATCCC CGGTTCAAGC GCAAGCGTGG CAAGCAGTCG AGCTACCATT GCATGAGCGT GAGCTGCGGT GAAAGCTGGG TCAAGGTGCC GAAGCTCGGC CCCATCAAGG CTAGAGTTCA TCGGTCCGTT GAGGGCAAAT TGAAAAGCAT CACCCTGTCG CGCACCGTTA CCGGCAAACA CTACGCGTCT CTCCTGTATG AAACCGAGCA ACCTGTCCCT GAGCCGATGA CGGCTATCGA CGCCACCAAG GTGCTCGGCT TGGACATGGG TCTCTCGCAC CTGGCGATTG ACTCCACTGG ACGAAAAGTA GCCAATCCAC GCTTTATCAA GCAGGTTCAG AAAAATCTCA AGCGCAAGCA ACAGTCGCTG TCACGAAAGC AAAAAGGCAG TTCCAAACGA GCAAAAGCAC GCCTACTGGT CGCTAAGGCT CACGAGCGGG TCGCTGATGC CCGCAGTGAC TTCCAGCATA AACTGTCCCG GCAGATCGTT GACGACAACC AAGCGGTGAT CGTCGAGACG CTGAAAGTCA ACAACATGAT GAAGAACGCC AAGCTCGCCA AGCATATCGG CGATGCCTCT TGGCACGCCT TGATCGCCAA GCTGGCATAC AAGGCCAAGG AGCAGGGCAA ACATCTGGTC AAGATCGACC CCTGGTTTGC CAGCTCAAAA ACTTGCCATG TATGCCAGCA CAAGATGGAT GCCATGCCAC TAAATATCCG GTCGTGGGCG TGCCCTACCT GCCACACGCG CCATGACCGC GACATCAACG CGGCGCTGAA CATCCAACAT CAAGGCATTT TGAAGTTGAA GGCGGAAGGG CTGTCCGTCT CTGCCCATCG AGGCTTGCGT AAATCCGGCA TGCCGCCGGT GGCTGCCGTT GAAGTGGGAA GCTCCGTCCG ATAG
|
Protein sequence | MLKATKIRLY PTREQAEFLN RQFGSVRFCY NTGLRIMSHR YKRHGQSLSA KYDIKKLLPV AKKSRKYGWL KEADSVALAQ ACINLDKAFQ RFFKEKKGYP RFKRKRGKQS SYHCMSVSCG ESWVKVPKLG PIKARVHRSV EGKLKSITLS RTVTGKHYAS LLYETEQPVP EPMTAIDATK VLGLDMGLSH LAIDSTGRKV ANPRFIKQVQ KNLKRKQQSL SRKQKGSSKR AKARLLVAKA HERVADARSD FQHKLSRQIV DDNQAVIVET LKVNNMMKNA KLAKHIGDAS WHALIAKLAY KAKEQGKHLV KIDPWFASSK TCHVCQHKMD AMPLNIRSWA CPTCHTRHDR DINAALNIQH QGILKLKAEG LSVSAHRGLR KSGMPPVAAV EVGSSVR
|
| |