Gene Noc_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1473 
Symbol 
ID3706003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1633515 
End bp1634147 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content54% 
IMG OID637737960 
Producthypothetical protein 
Protein accessionYP_343489 
Protein GI77164964 
COG category[T] Signal transduction mechanisms 
COG ID[COG3806] Anti-sigma factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGA AGGAAAATAA AGCGTGGATC GATTTGGCGC TCGAAAATCT ATCCGAAAAG 
GAACTTAAAG AGCTACGGCA AAATTTAGCT TCCGATCCCC AATTCCAGGA AGAACTAGTT 
TCGGTAAAAG AGCTCCTAGC GGCAATTGCC CTTAACCTTG AACCGGAACC TCCAGCGCCG 
GAACTCAAAG CCCGCCTTCT TGATGGCATT TGCGGCAAAA ACCGGTTTCT TCCGTTTCTA 
TCGCGCCTCA CCGAGCTATT CGATCTTTCC CCCAGGGAAG CGCAGGCTTA CCTCGAACGC 
CTCGATGATC CCACCGCCTG GAAGACGGTG CTGCCAGGGG TCCAGACGAT CAAAATTCAG 
GCGGGGCCAG CAACCGCAGG CGCGAAGAGC AATTTCCTCC GCGTGCTACC AGGAGCCAGC 
TTTCCCTACC ACACCCACCG GGGTCTTGAA TCCAGTTTGT TGCTGCAAGG ATGCTGCCGC 
TCCGAAGATG GAGTCATTAA TCGCGCTGGA GATTTGCTCT ACCAAGAAAC GGGCACGGCC 
CATAGCTTCC AGGTAATATC CGAGCAGGCG GTTATCGCCG CCGTGGTATG CTTTGGAATC 
GACTTCATTA ATCCGCCAGA TCGGAAACGG TAA
 
Protein sequence
MKRKENKAWI DLALENLSEK ELKELRQNLA SDPQFQEELV SVKELLAAIA LNLEPEPPAP 
ELKARLLDGI CGKNRFLPFL SRLTELFDLS PREAQAYLER LDDPTAWKTV LPGVQTIKIQ 
AGPATAGAKS NFLRVLPGAS FPYHTHRGLE SSLLLQGCCR SEDGVINRAG DLLYQETGTA 
HSFQVISEQA VIAAVVCFGI DFINPPDRKR