Gene Noc_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1448 
Symbol 
ID3706017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1604841 
End bp1605701 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content51% 
IMG OID637737938 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_343467 
Protein GI77164942 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGCC ACACTTCAAA GCCTAGTGCA AGGAGGAGTA TGCGCCAATC TAAATCGCAA 
ACAGAGGAAG AGGCGGTAAA AAGTCGTCTG GAGCAGCTAA AAAAGATATT TATAACCCGC
TGGGTTGAGG TCGACAATCT GTTCATTCAT GCCCGGGTCA ACACAGAGCA GGCCCCAGAT
AATGTTCTAC CCGTAGTATT GGTCCACGGC CTCGGACTTT CTAGCACCTA CCTGCTCCCC
ATTGCCGCTG AGCTCGCCCA TGAGCATCCC GTTTATGCGC CTGATCTCCC CGGCTTTGGC
CTCAGCGCCA AACCAAAGCG GGTGTTGAAT GTCCAGCAAT TAGGAGATGC GCTCGCAGCT
TGGATAGAAG CCACCGGGCT ACCGCAAGTA GCACTGCTCG GAAACTCCTT TGGCTGTCAA
ATTATCATCG AATGCATGGC GCGCCACCCT GAGCTAATAG CTTGCGCTAT TTTGCAAGGA
CCCACCACGT CCCCCTCAGA ACGGAGCTGG TTCTGGCAAT TCGTGCGCTG GCAGCAAAAT
TCCAACCCCA AACCAATGGG AGAAATTGCC CGGCAAGATT ATCGTGCATG CGGTATTTAC
CGACTAGCAC GTACTTTTCA GTACTCTATC CGCCATCGTC CGGAAGATAT TCTCGCTCAG
ATTAAAATAC CTGTTCTAGT GGTACGAGGA AGCGATGATC CTATATGCCA CTCGGAATGG
GTAGATGAAA TTGTCCACCT TCTACCCGGC GGTAAAAAAG TTGTCATTCC AGAGGTACAG
CACACGTTGG TATGGACTGC TCCTAGCCAG CTCGCAGAAG TGTGCCGGCC TTTTTTAGCG
AACGCTACTT CTCTAGGATA A
 
Protein sequence
MTRHTSKPSA RRSMRQSKSQ TEEEAVKSRL EQLKKIFITR WVEVDNLFIH ARVNTEQAPD 
NVLPVVLVHG LGLSSTYLLP IAAELAHEHP VYAPDLPGFG LSAKPKRVLN VQQLGDALAA
WIEATGLPQV ALLGNSFGCQ IIIECMARHP ELIACAILQG PTTSPSERSW FWQFVRWQQN
SNPKPMGEIA RQDYRACGIY RLARTFQYSI RHRPEDILAQ IKIPVLVVRG SDDPICHSEW
VDEIVHLLPG GKKVVIPEVQ HTLVWTAPSQ LAEVCRPFLA NATSLG