Gene Noc_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1417 
Symbol 
ID3706064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1570888 
End bp1571523 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content50% 
IMG OID637737907 
Producthypothetical protein 
Protein accessionYP_343436 
Protein GI77164911 
COG category[S] Function unknown 
COG ID[COG3821] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.367246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCATT GGGAGTATGG GATAACGCTG CTGGCCTTTA CGCTGTTAGG TGGCTATCAT 
TTTTATTTGT TCTGGCGAAT ACGCAGGCGG CCGTTATCCA CGGCGGTGGG CCTGTCCCGG 
CGCATCCGTA AGCTATGGGT CAAGAGGATC ATACAAGAAG GACGGGATAT TCTAGCCGTC 
CAAACCTTAC GTAACTGGAC CATGGCAGCG ACGCTTCTTG CCTCCACTGC AATTTTGCTG 
GGCCTTGGTC TGCTGAATGT GGCTTTTACC ACGGAGCAAC AACCCCAGCT GTCCAAGCTG 
CTGAATTACT TGGGCTACGA TAGCGAGTTA GCGTGGCTAT TGAAGCTGGT GATATTGAGC 
GGGGATTTCT TTTTTGCTTT TTTTAATTTT ACCCTGGCGA TTCGCTACTA CAATCATACG 
GGCTTTATGA TTAATGTCCC TGCGTGCCAG GAAGCCGGCG TGAGCGCTAA AACAGTCACG 
GAAATACTGC AGCGGGGCGC TAACCACTAT ACGTTAGGGA TGCGGGGCTA TTATTTGGCT 
ATCCCTTTGT CTCTATGGCT ATTCGGTTCT GTATGGCTGC TGGGTGGAAC ATTACTATTG 
CTAGTAGTGC TCTATCGGCT AGATCGGTTT GTGTGA
 
Protein sequence
MLHWEYGITL LAFTLLGGYH FYLFWRIRRR PLSTAVGLSR RIRKLWVKRI IQEGRDILAV 
QTLRNWTMAA TLLASTAILL GLGLLNVAFT TEQQPQLSKL LNYLGYDSEL AWLLKLVILS 
GDFFFAFFNF TLAIRYYNHT GFMINVPACQ EAGVSAKTVT EILQRGANHY TLGMRGYYLA 
IPLSLWLFGS VWLLGGTLLL LVVLYRLDRF V