Gene Noc_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1398 
Symbol 
ID3706084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1549012 
End bp1549371 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content57% 
IMG OID637737891 
Productputative transposase 
Protein accessionYP_343420 
Protein GI77164895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.14503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTATC CCTCTTCATT CCGCCGTAAA GTTCTATCCG TTCGCGAGAA GGAAGGGCTT 
ACGATGGCGC AGGTGGCGGC GCGTTTTTGT GTGGGTGTGG CCAGCGTCCC ACGCTGGGTT
AAAAACCCTG AGCCCAAGCT CACCCGTCAT AAACCGGCGA CGAAGATGGA TAGAGACGCT
CTGGCACGTG ATGTGTTGGA GCATCCCGAT GCGTATCACT ATGAACGCGC ACGGCGGCTG
GGCGTGAGCG AGAAAGGCAT CGGCCATGCT CTGCCTCGTA GGGGCATCAC CTATAAAAAA
AACGCTAAAG CATCCGCGCC GATGCGAAGG CGCGCGGCCT CTGTTCCAGA CATTCATTAG
 
Protein sequence
MTYPSSFRRK VLSVREKEGL TMAQVAARFC VGVASVPRWV KNPEPKLTRH KPATKMDRDA 
LARDVLEHPD AYHYERARRL GVSEKGIGHA LPRRGITYKK NAKASAPMRR RAASVPDIH