Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1387 |
Symbol | |
ID | 3706073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1536473 |
End bp | 1538791 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737881 |
Product | peptidase S16, ATP-dependent protease La |
Protein accession | YP_343410 |
Protein GI | 77164885 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAACA ACGCTTATCC AACATTGCCG CTTAAAAATA CTGTCCTCTT TCCCCACCTG GTCCTTCCCC TGTCGGTGGG GCGAGCAGGA TCTATAGCCG CAGTCGAGGC GGCGCTGAGC AGCGAAGATA AACTAATTGC TGTCTTTCCT CAAAAGGATC CCCGGACTGA CGAACCCGCT GCGGATGATT TATTCCGCTT TGGCACGGTA GGAATCATCA AAAAGATGGT CAGGAGCGAG GATACGGTTC AGATTCTAGT TCAGGGAATA GAGCGGGTTG AGCAGCTAGA AATGGTCCAG AAGCAACCTT ATCTTTCCCT CAAAATTGCC ACTCTCTCTG AACCCTCGGA TACGGGCACT GAAATCGAAG CCTTGCACCG AACTGTTATC GAACTCGCTG GCAAAATGAT TGAACTGGTG CAACCCCAGA TCCAGGTCGG CATCCACCAC ATTATTTCCG ACGTGGAAAA GCCCCTCCAC CAGATCTATC TTCTCACCTC TATCCTCTCG CTGGATTTTG ACAAGGAGAA AGAACTGCTG GCTGCCGCTA CCCAGGTAGA AGCCTTGCAG TTAATGCACC GTTATCTTAA CCACGAAGTG CAGGTTCTGG AGGTGCGGCA AAAAATCACC AGCACCGCCC AAACAGAGAT AGATAAGAAA CAGCGTGAAT ATGTCCTACG CCAGCAATTA GAGGCCATCC AAGAAGAACT GGGGGAGACT AACCCTGAAC AGGCTGAGAT CAAGGAGTTA CGCCAGCGAA TGGAAGAAAC GGAACTCCCG GAGCTGGTCC GCAAAGAAGT GGAGAAAGAA ATTACCCGAT TGGAACGGAT GCCTTCGGCT GCTCCTGATT ATCAGCTGAC CCGCGGTTAC GTGGAGCTAG CCCTAGAATT ACCCTGGAAT AAAACCACGG AAGATCGTTT AGATCTCAAA AGGGCGCGCG AGATCCTCGA TGAAGATCAC TTCGACTTGG AAGACGTCAA AGAACGGATC ATCGAACATC TGGCGGTGAT GAAACTCAAC CCGGAAGCTA AATCGCCCAT TCTTTGCTTC GTTGGCCCCC CTGGAGTTGG TAAAACCTCG GTGGGACAAT CCATGGCCCG CGCCTTGGGA CGAAAATTCG AGCGCATGAG TCTTGGTGGC CTGCATGATG AATCGGAGTT GCGCGGCCAT CGCCGCACCT ACATTGGTGC TATGCCTGGC CGAATCATTC GCGCCATTCG CCGTACTGGT TACCAGAATC CGCTTCTAAT GTTGGATGAA ATCGACAAAC TGGGCCGGGA TTTTCGCGGC GATCCGGCGG CGGCATTATT AGAGATTCTT GATCCCGCCC AGAATGCCGA ATTTCATGAT AACTACTTGG ATCTGCCTTT CGATCTTTCT AAAATCTTCT TCGTCACCAC CGCTAATACG TTAGATACCA TCCCCCGCCC TCTGCTTGAT CGGATGGAGA TTCTGCGGCT ACCGGGGTAC AGTGACGAAG AAAAACAACA TATCGCCCGT CGTTATCTAA TTGGACGGCA AATTAGAGAA GCCGGCCTTT CCGAGATCCA ACTCTCCATA CCGGATGAGA CATTAAGTTA CCTTATTCGG CGTTATACTC GGGAAGCCGG AGTGCGTGAA CTAGAGCGGA TGCTGGGGCG AATTGCCCGC AAAGTGGCTA CCCAAGTCGC CACTGGTCAA ACTCAGCCGG TAACCGTCAC GCCGCAAGAC CTTGTCGAAT TACTAGGACC AGAGCGATTT TTCGCTGAAG AAATGCGCCA GCAGCTCGCC CCCGGGGTCG CGGCAGGCTT AGCTTGGACC GAAGCGGGCG GCGATGTCTT GTACGTGGAA GCGGCTCTGC TACCAGAAGG GAAAGGGATG ACTCTGACGG GACAGCTGGG CAGTATCATG CAAGAATCAG CAAAAGCTGC CCAAAGCTAC CTCTGGTCCC GCGCCGAAGA ACTTAACATC GATCAAAAAA CCATCCGGGA ATCGGGGGTC CACATTCATG TTCCAGCGGG CGCTATCCCT AAAGATGGCC CCTCGGCCGG AGTCACCATG GCTTCAGCAC TCACTTCCGC TTACGCCCAT CAACCTGTTC GCAGCGATAC GGCAATGACA GGGGAAATAA CACTGAGTGG TTTAGTCCTT CCCGTGGGAG GGATTAAAGA GAAAGTGCTT GCCGCCCACC GGTCCGGCAT CCAGCGGATC ATTCTTCCCA AAGAAAATGA GAAAGACTTG CGGGAAATTC CCGAGCATGT CCGGCAAAGC ATTCAATTTA TTCTAGCCAG ACGGATTGAA GAGGTGCTAG CTGAAGCTAT CCCAGATTTA AATAGGTGA
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Protein sequence | MENNAYPTLP LKNTVLFPHL VLPLSVGRAG SIAAVEAALS SEDKLIAVFP QKDPRTDEPA ADDLFRFGTV GIIKKMVRSE DTVQILVQGI ERVEQLEMVQ KQPYLSLKIA TLSEPSDTGT EIEALHRTVI ELAGKMIELV QPQIQVGIHH IISDVEKPLH QIYLLTSILS LDFDKEKELL AAATQVEALQ LMHRYLNHEV QVLEVRQKIT STAQTEIDKK QREYVLRQQL EAIQEELGET NPEQAEIKEL RQRMEETELP ELVRKEVEKE ITRLERMPSA APDYQLTRGY VELALELPWN KTTEDRLDLK RAREILDEDH FDLEDVKERI IEHLAVMKLN PEAKSPILCF VGPPGVGKTS VGQSMARALG RKFERMSLGG LHDESELRGH RRTYIGAMPG RIIRAIRRTG YQNPLLMLDE IDKLGRDFRG DPAAALLEIL DPAQNAEFHD NYLDLPFDLS KIFFVTTANT LDTIPRPLLD RMEILRLPGY SDEEKQHIAR RYLIGRQIRE AGLSEIQLSI PDETLSYLIR RYTREAGVRE LERMLGRIAR KVATQVATGQ TQPVTVTPQD LVELLGPERF FAEEMRQQLA PGVAAGLAWT EAGGDVLYVE AALLPEGKGM TLTGQLGSIM QESAKAAQSY LWSRAEELNI DQKTIRESGV HIHVPAGAIP KDGPSAGVTM ASALTSAYAH QPVRSDTAMT GEITLSGLVL PVGGIKEKVL AAHRSGIQRI ILPKENEKDL REIPEHVRQS IQFILARRIE EVLAEAIPDL NR
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