Gene Noc_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1370 
Symbol 
ID3706095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1518294 
End bp1518908 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content51% 
IMG OID637737865 
ProductLmbE-like protein 
Protein accessionYP_343394 
Protein GI77164869 
COG category[S] Function unknown 
COG ID[COG2120] Uncharacterized proteins, LmbE homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.525647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATCG GAATGGGAGG TACTGCGGCC AAGAAAGCGG CCTCAGGTTC CCATATTACC 
TCGGTCATTT TAACTGATGG GAGGAGGAGC CCCAATCCCT TTGGCTGGCC GGAAGAAACC 
CTGGTGGAAA TTCGTAAGCA GGAGGCCACT CGAGCAGCGA GAGTGCTAGG AATCAAAGAA 
GTTATTTTCT TTGCTCTCCC TGATCTAAAA AATACTTCCC ATTACCATTC AGCAAAGGAG 
CGGCTTAGCG AGCTCATCAA GCAACTTCGC CCTGAAGAGG TCTATTCCCT CCACGATCAC 
TGGGACCGGC ATCCTACCCA CCGGCTAGCG GGGCAACTAA CCCGAAAATG TATCGAAGAA 
ACACCCCTAT TCATAGACGC CCTATGGGCT TACGAGGTTT GGGGATTATT TTCCCGCTGG 
GATCGCCTGG AATATATCGA TGATCAGATA GGGAAAAAAA TGCAGGCGAT AGGAGAACAT 
AAAAGCCAGC TCGCCTCCAT TCCTTATGGG GAAGGTATTT TGGGCCTCAA CCGGTGGCGG 
GCGGTCTTTG CCGATCCGCA ACAAACCACC CCTCAAGGAG TCTTTGCGGA AGTTTTTTTT 
ACCATGAAGC TATAG
 
Protein sequence
MEIGMGGTAA KKAASGSHIT SVILTDGRRS PNPFGWPEET LVEIRKQEAT RAARVLGIKE 
VIFFALPDLK NTSHYHSAKE RLSELIKQLR PEEVYSLHDH WDRHPTHRLA GQLTRKCIEE 
TPLFIDALWA YEVWGLFSRW DRLEYIDDQI GKKMQAIGEH KSQLASIPYG EGILGLNRWR 
AVFADPQQTT PQGVFAEVFF TMKL