Gene Noc_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1343 
Symbol 
ID3706146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1491960 
End bp1492310 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content40% 
IMG OID637737839 
Producthypothetical protein 
Protein accessionYP_343368 
Protein GI77164843 
COG category[S] Function unknown 
COG ID[COG2119] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.226368 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTCGGA AAAATAGAGC GATTAGCTCC GCATGGTTTT TTCTATTAGG CTCTATTAAT 
AAATGGAGAA TTACAACATT GGAATACAAA GTGCTCCTCA CAGTTTTTGT CGCAGTCTTC
ATTGCTGAGC TTGGCGACAA AACTCAATTA GCCACTATGT TATTTGCAGC AGATAAAGAG
GTAAGTAAGC TCGCTGTATT TATTGGGGCC TCGTTAGCAT TAATTGTGGC TTCAGGTATG
GGTGTTCTCG CTGGCGGCAT CATTTCGCAA TATATCAGTG AAAAACATCT GCATTACATT
GCTGGAGTTG GGTTCATTGG CATCGGCATA TGGATGCTTT TAAAAGCATG A
 
Protein sequence
MIRKNRAISS AWFFLLGSIN KWRITTLEYK VLLTVFVAVF IAELGDKTQL ATMLFAADKE 
VSKLAVFIGA SLALIVASGM GVLAGGIISQ YISEKHLHYI AGVGFIGIGI WMLLKA