Gene Noc_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1278 
Symbol 
ID3706351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1419126 
End bp1419656 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content48% 
IMG OID637737779 
Producthypothetical protein 
Protein accessionYP_343308 
Protein GI77164783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGGAT CATTATCAAG CAATGATGCA AAAGTACGGG ATCAGGAGCG AGGCGAGATG 
CTTGCGGATT ACTGGCCCTT GATCTCCCTA GTAGGCGGCT CTGCACTGGC AGCGTGGGCA
ATTGCTGATG GTTTTGCCAG TGTTGATATG CGCACCTTTA TGCATGCTTA TATGGGTGTA
TTTTTGCTTG TATTCGCGTT ATTGAAGATT TTTAACTTAA ACGGCTTTCA GGACGGATTT
GTGATGTATG ACCTGTTGGC CAAGCGGGTC AGAGCCTACG GCTATGTTTA TCCTTTTATT
GAGCTGGCCC TTGCCATTAT GTACCTTAAC TTCATGGCGC CTGAGTTTAC CTACTGGGCT
ACCGTGGGGG TTTTTAGCTT TGGTGCGATT GGCGTCGTAA TAGCGTTGCG GCAGGGACTT
GATATCAATT GCCCCTGTAT GGGCAGCGTG CTTTCGGTTC CTCTCTCTAC CGTAACCCTA
ACGGAAGATA TCGGCATGCT GGTAATGGCG CTATTGTTAT TGTTCGTTTA G
 
Protein sequence
MGGSLSSNDA KVRDQERGEM LADYWPLISL VGGSALAAWA IADGFASVDM RTFMHAYMGV 
FLLVFALLKI FNLNGFQDGF VMYDLLAKRV RAYGYVYPFI ELALAIMYLN FMAPEFTYWA
TVGVFSFGAI GVVIALRQGL DINCPCMGSV LSVPLSTVTL TEDIGMLVMA LLLLFV