Gene Noc_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1270 
Symbol 
ID3706343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1402383 
End bp1403249 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content42% 
IMG OID637737772 
Producthypothetical protein 
Protein accessionYP_343301 
Protein GI77164776 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGATT CACCAGCAAT TGCTGTCATA TATCCAGATA TCAGGGAACC TTATCGGGGT 
ATTTTTCTTA AAATTATAAA AGGAATTGAG AATAAGCTAA AAAAAACCGT CAAAATTTAC
CCGTTAGAAA AAGATTATGA TATTGAAGCA GTCAAATATT ACCTCAGGAA AGCGCAGATA
CAGGGTGTTA TTGTTCTTGG AAGCAGAGGG TTATCGGCAG CGAAAGATCT ACAATTCATG
TTTCATGTTG TTGTCGGTGC GGTGTTGATT TCTCCTAATG GGGAGGATCT GACAGGCATC
TCACTGACAC CTGATCCTGC AATTCTCTTT CAGAAGCTTC TGGAAATTGA CCCTCGCATT
AAGCGAATTA CTCTGATTTA TAATCGGGAT CAGACCGAAT GGCTTATTGA GAGGGCAGTA
AAAGCGGCTA GATTTTATAG CATAGAGATT AATACGTTCC CTGTGGAAAA TATTCGTGAA
GCGGCTACGC TGTACCGCGA TATCTTACAA CACTTGGAAG AGGGGAAAGA CGCGATTTGG
CTGCCTCAGG ACTCCACTAT TGATGAACAG GCCATTCTAC CGCTTATTCT GAAAAAATCT
TGGGAACGGA ATCTAGCCGT ATTTTCTAGT AATTTAGCTC ATATACCGAG AGGAGCCCTG
TTTGCTCTCT ATCCAGATAA TGAAAGAATG GGGCAGAGCC TTGCGGCGCT AGCATTAGAG
GAAATAAAAA ATAATAAAAG ATCTATCGGG ATAATTCCAT TGCGTGATCT TTTAACCGCC
GTCAATACGC GTACCGCAGA TCATCTAGGG CTTAATTTAA CGAGTCGGAT GAAGCAGAAT
TTTGATTTGT CTTTTCCGGC ACGATAG
 
Protein sequence
MADSPAIAVI YPDIREPYRG IFLKIIKGIE NKLKKTVKIY PLEKDYDIEA VKYYLRKAQI 
QGVIVLGSRG LSAAKDLQFM FHVVVGAVLI SPNGEDLTGI SLTPDPAILF QKLLEIDPRI
KRITLIYNRD QTEWLIERAV KAARFYSIEI NTFPVENIRE AATLYRDILQ HLEEGKDAIW
LPQDSTIDEQ AILPLILKKS WERNLAVFSS NLAHIPRGAL FALYPDNERM GQSLAALALE
EIKNNKRSIG IIPLRDLLTA VNTRTADHLG LNLTSRMKQN FDLSFPAR