Gene Noc_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1167 
Symbol 
ID3706819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1277101 
End bp1278348 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content50% 
IMG OID637737671 
ProductSignal transduction histidine kinase 
Protein accessionYP_343200 
Protein GI77164675 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCACA TTCTTTCAGA GTTAAGCCGC TACTTGAATA GCGAGCAAAA AACGATCTTC 
AAGCGATGGA TGGAAGCCTG CAAGGAGGAT GCGGCGCTGG GCGCGGCGGC CAAACTTACC
TATACTGAAT TCCGCAATAA TATCCCCGCC GCCATGGATG AATTATGCCG AATATTGAAG
TGCGAAAATA AACCAGCCTC CTCAGGGAGG GTAAAATGCG AGGTTGCCAA ACATGGGCAT
CACCGCTGGA AGCAGGGCTT CAGTCTCAAG GAACTGATTA GGGACTGGGG TCACTTGAAT
CAGGTGCTGA TCACTACCAT CGAAACCTTC TTTCAAGTCC ACTACCCCCA TGCCACCGCC
GATAGGATCA AAGCCTTGGA GCGGATGGCG GATTTCATGA TCGAAGCAAC CAGTCACAGC
GTACGGCGTT TTGACGGCCT TCGCCAGGCC GAAGCGGCAG CCCTGACCCA AGATCTAGAA
CTAGCAAGAG CTCAATTTGA GCGATTGACC GAGGCTCGGG GCAAATTGTT ACGGGAAGCA
ACACACGATA TACGGGGAGG ATTGTCGGCT ATTGAAGGCG CCTCGGCTAT CCTCAATATT
ACTAAAAAAC CCCATGAGTC CTTTACTCAC ATACTAGACA TTCTCAATGC GGGTATAAAT
TCAGTAAAAG AGATGCTGGA CTCGCTGCTT GAACTATCCC GGTTGGAATC AGGCGCGGAC
GAAGTTAAGC TACTTTCGGT TAACATTACC GATGTGCTTC AGCAACTAGC GGCAGAATAC
CGGGCAGTAG CCCTACAAAA AGACTTACGG TTAAGCACCG AGGGTCCCGC GGAAATGTGG
GTGCGAACCG ATCCAGAAAA AGTCCGGCGT ATCGCTCAAA ATCTGTTGAT TAATGCTTTG
AAACATACCT CTAGCGGTGA GGTTCATATG TCCTGGAGGC TAGAATCTGA ACGATGGCTA
ATGGATGTTA GCGATACGGG GCCGGGAATA CAGGCAGTGC TTGGCTCGCC AGTGGCCCAG
GAGCTGAATC ACCCTGACTC CGCGCTTGGC GTTAGCGTGG ATCACTCATC TTCTAGTATT
AATCCGGATC ATGCATACGC TGGCGAAGGA ATCGGTTTGA CTATTGTAAA GCGGCTATGC
GATCTATTGG ATGCAGGCAT TTCCCTCGAC TCTGAGGTAG GCCAGGGGAC AAGATTTGTT
GTGGAATTTC CCCGCAATTA CTATAAAACA AATCAGGTAG ATGAATGA
 
Protein sequence
MDHILSELSR YLNSEQKTIF KRWMEACKED AALGAAAKLT YTEFRNNIPA AMDELCRILK 
CENKPASSGR VKCEVAKHGH HRWKQGFSLK ELIRDWGHLN QVLITTIETF FQVHYPHATA
DRIKALERMA DFMIEATSHS VRRFDGLRQA EAAALTQDLE LARAQFERLT EARGKLLREA
THDIRGGLSA IEGASAILNI TKKPHESFTH ILDILNAGIN SVKEMLDSLL ELSRLESGAD
EVKLLSVNIT DVLQQLAAEY RAVALQKDLR LSTEGPAEMW VRTDPEKVRR IAQNLLINAL
KHTSSGEVHM SWRLESERWL MDVSDTGPGI QAVLGSPVAQ ELNHPDSALG VSVDHSSSSI
NPDHAYAGEG IGLTIVKRLC DLLDAGISLD SEVGQGTRFV VEFPRNYYKT NQVDE