Gene Noc_1153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1153 
Symbol 
ID3706918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1260556 
End bp1261455 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content49% 
IMG OID637737657 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_343187 
Protein GI77164662 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCATC TCAGCAATCA ACACGTGATA CTCAAGGACG GCCGCCGTCT CGGCTATGCC 
GAATACGGTG ATCTTCAAGG CGAGCCTCTC TTTTATTGCC ATGGTTTTCC GGCCTCCCGG
CTGGAAGCCA AAATCATTGA TGCGCCGGCA AGAAAAAATC GCTGGCGTAT TATTGCTATC
GATCGCCCAG GCTATGGATT ATCGGATTTC AAGCCCAAAC GGCGCATTCT TGATTGGCCT
GATGATGTGG CTGAACTCGC TTATATCCTA GGTATTTCTT CTTTTTCCCT TTTGGGAATG
TCAGGAGGTG GCCCCTATGC TCTTGCCTGC GCCTGGAGAA TCCCTTCTTG CCTTCGGGGA
GTTAGCATCG TTAATGGCCT CGGGCCAGTA TATGAACCTT GGGCAGCCCG TGAGATGAAA
TGGCCCGCTC GCTTGGGATT CGGCTTAGCT AAACGTGCAT CCTGGCTCTT ACCCTTTATC
TATGGAGGAA TCATTGCCCG AGCGTTGTGC TGGTTCCCCC GGCTAACCCA ATCTTTATTA
ACCATTTCCG CCCCAGAGGC AGACAGCCAA GCGCTAAAAC GCCACGATAT GAAAAGATTT
CACTTGGTGT CCATACAAGA AGCCTTTCGC AATGGTCCCA AAGGCGCGCT TTTAGATTTT
AAGCTCTATG CTCACCCTTG GGGATTCCTG CTAAAAGAAA TTAATTTAAA CATTCAGCTA
TGGCAGGGGG AAGCCGATGC AACGGTACCC CTCTCCCATG CCCGGTACCT GGCAAAAATA
CTACCCACCG TCCAGGCCCA TTATCTCCCT AATGAAGGTC ATTTTTCTCT GCTCATCAAC
CACATAAACG ATATTTTGGA GGATTTGAGA GAAACCCAGA AAAAGCCTAT TCTCCGATAA
 
Protein sequence
MTHLSNQHVI LKDGRRLGYA EYGDLQGEPL FYCHGFPASR LEAKIIDAPA RKNRWRIIAI 
DRPGYGLSDF KPKRRILDWP DDVAELAYIL GISSFSLLGM SGGGPYALAC AWRIPSCLRG
VSIVNGLGPV YEPWAAREMK WPARLGFGLA KRASWLLPFI YGGIIARALC WFPRLTQSLL
TISAPEADSQ ALKRHDMKRF HLVSIQEAFR NGPKGALLDF KLYAHPWGFL LKEINLNIQL
WQGEADATVP LSHARYLAKI LPTVQAHYLP NEGHFSLLIN HINDILEDLR ETQKKPILR