| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1129 |
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| Symbol | |
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| ID | 3706964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1231994 |
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| End bp | 1233100 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637737630 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_343163 |
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| Protein GI | 77164638 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.827247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGAC TTATCTTGCT GATGACTTGC CTGCTGGGCG GTCTGGTCAA TATGTCTGCC
GTGCTCGCAC AACCCCAAAC ACCGCCGCCC AGCGTTATGG TCAGCGAAGT GCATAAACGC
GATATTACTC CCACCCTTGA GTTACTAGGT CGGGTTGAGG CACGGGATGA AGTAGCCTTG
CGGGCGCGTA TCGAGGGTGT ACTGGAGCAG CGTAACTTTG AAGAAGGCGG TTTGGTGGAG
CAGGATCAGC TGTTGTTTGT CATCGAGAAA CGGCCCTTTG AGGTTCAGGT GCAACAGGCA
AAGGCCGAAC TCGCCTCCGC CCAAGCTAGT TTGAAAAATG CCCAGGCTAA CTTGAGGCGA
TTGCAGGAGT TGCATGACCG CAAACTGGTA TCGGCTGCGG ATCTGGATAC CGCTCAGGCC
GAAGCCAGTA TCGCTGAAGC CAATGTATTC AAGGCTCAAG CGGCGCTGGA GGGCGCTGAG
CTAAGCTTAA GTTATACCGA AATTCGCAGT CCGATTCGTG GGCGCATCAG TGGAGCGACT
TACAGCGTGG GTAACCTGGT CGGCCCAGGT AGTGAACCAT TGGCGACTGT ATTTAGCTTT
GATCCTATCC ACGTCAGCCT AGCGGTCAGC GATAAAGTGC TGCTCAATGC CCGTCAGCAA
GGGATTATTG CCTCCGGCGA TCCCCCCGTC GCACCGTCCC TGGTGCTCTC CGACGGCAGT
TTGTATCCTA AGCGGGGGCG ATTTGACTAT CTTGCCCCGG AAGTTGATCG CAGTACCGAT
ACCGTCCAGG TGTGGGCGCT GTTCCCCAAT TCCAAAGAAA TTTTGCTACC GGGCCAGTTC
GTCAACGTGC TGATTCGCCG GAAACAGCCG ATCACCGCAT TGATAGTGCC CCAGACGGCG
GTGCAACAAG ATAAGCAGGG ATTTTTTGTC CTTGTGGTCA ATCGCGCCAA TCAGGTCGAG
GTGCGCCGTA TTGTCACTGA CCGCCAGGTG GGCAACGACT GGGTTGTCGA GTCCGGTTTG
GCCGCCGGTG ACCGGGTCAT CGTCCAGGGG GTGCAGAAAG TACGGCCTAA TATGTCCGTC
AATCCGGTCA CTGCAGACGA ACCCTGA
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| Protein sequence | MARLILLMTC LLGGLVNMSA VLAQPQTPPP SVMVSEVHKR DITPTLELLG RVEARDEVAL
RARIEGVLEQ RNFEEGGLVE QDQLLFVIEK RPFEVQVQQA KAELASAQAS LKNAQANLRR
LQELHDRKLV SAADLDTAQA EASIAEANVF KAQAALEGAE LSLSYTEIRS PIRGRISGAT
YSVGNLVGPG SEPLATVFSF DPIHVSLAVS DKVLLNARQQ GIIASGDPPV APSLVLSDGS
LYPKRGRFDY LAPEVDRSTD TVQVWALFPN SKEILLPGQF VNVLIRRKQP ITALIVPQTA
VQQDKQGFFV LVVNRANQVE VRRIVTDRQV GNDWVVESGL AAGDRVIVQG VQKVRPNMSV
NPVTADEP
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