Gene Noc_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1121 
Symbol 
ID3707130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1222000 
End bp1222959 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content53% 
IMG OID637737622 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_343155 
Protein GI77164630 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.308781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTA CCCTGACCTC GCTGTTTAAT ATTTTCGGGA TCCTGGGAAC ATTGCTTACG 
CTAGCGGCCT TGCTGATTTG GATCGAACGC CGCTTGCTGG GATTCTGGCA GGAGCGCTAC
GGCCCCAACC GGGTGGGCCC TTTCGGCATC CTGCAAGTGG TAGCCGATGC CATCAAGCTT
CTTACCAAAG AAGACTGGGT GCCGCCTTTC GCCGACAAAC TGGTTTTTAT CCTCGCGCCC
ACAGTGGTCG TCATTGCCAC TTTGTTGGCC TTTGCGGTGA TTCCCTTTAC ACCCTATATT
GGCATTATCG ATCTGAATAT CGGGCTGCTG TTTTTCCTCG CCATGTCCTC CCTTTCCGTC
TACAGCGTGG TATTAGGGGG TTGGGCCTCC AATAACAAGT ATTCCTTAAT GGGGGCTCTG
CGGGCGGCGG CCCAGATGTT GAGCTATGAA GTTTTTATGG GTTTGTCTCT GATGGGGGTA
GTCATGCTGG CCGGCACCTT TAATCTCCGT GAAATCGTAG CAGCTCAACA AGACATGTGG
TTTTGCATTC CCCAGTTTCT TGGCTTAGTG GTATTTCTGA TTGCCGGGAT CGCGGAAGCT
CATCGCCTGC CCTTTGATCT CCCCGAAGCC GAAACTGAAT TGATAGCAGG CTTTCACACC
GAGTACTCGG GAATGAAGTT CGGCCTATTT TTTGTCGGTG AGTACCTCGC TATTCTTTTG
ATTTCGGCTC TGATCGTGAC GCTGTTCTTT GGTGGTTGGC AGGGTCCTTG GCTACCACCC
CTAGTGTGGT TTTTTATCAA ATTCTCTTTC TTTGTGCTTT TCTTTATTTT GCTGCGGGCC
GCGCTCCCCC GGCCCCGCTA CGATCAGCTC ATGGCCTATG GCTGGAAGCT GATGTTGCCC
CTAGCGCTGC TCAATCTAGT GATTACCGGG GCGGTGGTGC TTGCCCTTGA CGGCACCTAA
 
Protein sequence
MNATLTSLFN IFGILGTLLT LAALLIWIER RLLGFWQERY GPNRVGPFGI LQVVADAIKL 
LTKEDWVPPF ADKLVFILAP TVVVIATLLA FAVIPFTPYI GIIDLNIGLL FFLAMSSLSV
YSVVLGGWAS NNKYSLMGAL RAAAQMLSYE VFMGLSLMGV VMLAGTFNLR EIVAAQQDMW
FCIPQFLGLV VFLIAGIAEA HRLPFDLPEA ETELIAGFHT EYSGMKFGLF FVGEYLAILL
ISALIVTLFF GGWQGPWLPP LVWFFIKFSF FVLFFILLRA ALPRPRYDQL MAYGWKLMLP
LALLNLVITG AVVLALDGT