Gene Noc_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1110 
Symbol 
ID3707119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1211858 
End bp1212190 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content40% 
IMG OID637737611 
ProductHicB-related protein 
Protein accessionYP_343144 
Protein GI77164619 
COG category[S] Function unknown 
COG ID[COG4226] Uncharacterized protein encoded in hypervariable junctions of pilus gene clusters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTT TAGAAGTTGA CGGCTTTAAA GCAAAAATTG AGTTCGACCC TGATCTTGAT 
CTTTTTCGGG GCGAGATACT TGGATTGAAT GGCAGTGCTG ATTTCTATGG GAAAAGCCCG
GCAAGTTTAC GAAAAGAGTT TAAAAACTCG CTAAAAGTAT TTCTGGAAGT TTGTGAGGAA
AAAGGTATAG AGCCCACAAA AGAATTTTCA GGTAAGTTTA ACTTAAGAAT TCCACCCAGA
TTACACAGTG AAATTTCGGC TAAGGCGGCC GCATCGAACA AGAGTATCAA TCAATGGGTG
GTCGAGGTTT TGGAAGAGTC TGTAAATGAA TGA
 
Protein sequence
MNVLEVDGFK AKIEFDPDLD LFRGEILGLN GSADFYGKSP ASLRKEFKNS LKVFLEVCEE 
KGIEPTKEFS GKFNLRIPPR LHSEISAKAA ASNKSINQWV VEVLEESVNE