Gene Noc_1027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1027 
Symbol 
ID3707249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1137493 
End bp1138014 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content52% 
IMG OID637737532 
ProductMarR family transcriptional regulator 
Protein accessionYP_343065 
Protein GI77164540 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA CTAACGAAGT CCTGGTGGCG CTGCGCCAGA TCATCCGGGC TACTGATCTT 
CACTCCAAAC AACTCAACAA GGTTTCGGGC CTGACGGCAC CCCAACTCTT GATTATGCAA
ACCATTCGCC GGGTGGGAGA AATGACGATT GGTGTCCTCG CCAGGGAAGT CAGTCTCAGC
CAAGCCACAG TCACCAACAT CTTGGATCGT TTGGAAAAGC GGGGCTTGAT CCACCGCCAG
CGCGGTGAAA CTGATAAGCG TAAAGTCTAC GTCCAACTGA CAGCAAGCAG TGAGAAACTC
ATTCAGAATT CGCCTGCGCT GTTACAAACC AGTTTTATCA GGCAATTCGA AGGTTTGCAG
GATTGGGAAC AAAATCTCAT TATCTCGGCC TTGCAGCGGG TCGCCGAAAT GATGAACGCT
ACCGATATAG CGGCTTCCTC TTATCTGGAG GTGGACGAAT TAGGTGATCT CCCGCTCCTG
GAGACGCCTC GGTTCCCCAC CAAGCAGCAA ACTATCCGCT GA
 
Protein sequence
MKDTNEVLVA LRQIIRATDL HSKQLNKVSG LTAPQLLIMQ TIRRVGEMTI GVLAREVSLS 
QATVTNILDR LEKRGLIHRQ RGETDKRKVY VQLTASSEKL IQNSPALLQT SFIRQFEGLQ
DWEQNLIISA LQRVAEMMNA TDIAASSYLE VDELGDLPLL ETPRFPTKQQ TIR