Gene Noc_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1006 
Symbol 
ID3707398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1112605 
End bp1113582 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content48% 
IMG OID637737511 
ProductATP/GTP-binding protein 
Protein accessionYP_343044 
Protein GI77164519 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.949119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCTGT CACAACTCCA GAGCACTCAG TCGACGGTAA AAACTTATCT GGCGCAGGCC 
CAAATACCCC ATTATATGGA ACTGGGTGCT ACCCTTTATA TGCCTGCTAC GCGGAAAGAT
ATTGCAAGAG TTCTCAATCA ACAAAAGCTG ACTGGTTTGC GTTCGGCGGT GGTATGCACT
GAAGATTCCA TCTTGGAACA AGATCTATCT CCTGCGCTCG CTAATTTACG GTTAGTATTA
GAGCAACTTC GCCCTTCCTC CATGCTGCGT TTCATTCGTC CTCGCAACCT CGAGGTATTG
TCTCAATTGA TGCGTATCCC TGAAATTAGA AGGATAGATG GATTTATATT GCCTAAGGTA
GACGAGAAGA ATCTGCCACT TTACGCAGAA CTGGCTGCCC GGATTCCAGA GCTACTTTTG
ATGCCTACGC TTGAGACTGA GATGGCTTTT AGTCGGCAAC GGCTTGAGGC ACTGCGTAAG
GGACTTGCTA AGGTGAGCAA TCCCATTTTA TGCCTTCGGA TTGGTGGTAA TGATCTCCTG
CGTTTGTTGG GGTTAAAGCG GCCTAAACAT TTGACAATAT ACGATACGCC GCTGCGGAAC
ATCATCAATG ATGTCATCCT GACTTTCCGT CCAGCGGGTT ATGGGCTTTC TTCTCCGGTT
TTTGAGTATC TTGATAACTA TGCTACTTTG CAGCGTGAAG TAGCGTTGGA TATTGTCCAT
GGCTTGCTCA CGAAGGCAGC CATTCATCCT AGTCAAATTC CAGTGGTGGA AAGGGCCTAT
CAGGTCTGTC AAAAAGATAT GGAGTTAGCG CAGCGCGTCC TTGAGGAAGG AACGCCAGCC
GTTTTTAAAC TTAATAGCCA AATGGTTGAA CCGGCTACCC ATTGCGCATG GGCGGAACGG
CTGCTGTTAC AAGCCGAGCT GTATGGTGTC TGTTGTGAGC AGCTGAACGG GTGTGATTGT
ACTCCCAATG TTTCTTGA
 
Protein sequence
MYLSQLQSTQ STVKTYLAQA QIPHYMELGA TLYMPATRKD IARVLNQQKL TGLRSAVVCT 
EDSILEQDLS PALANLRLVL EQLRPSSMLR FIRPRNLEVL SQLMRIPEIR RIDGFILPKV
DEKNLPLYAE LAARIPELLL MPTLETEMAF SRQRLEALRK GLAKVSNPIL CLRIGGNDLL
RLLGLKRPKH LTIYDTPLRN IINDVILTFR PAGYGLSSPV FEYLDNYATL QREVALDIVH
GLLTKAAIHP SQIPVVERAY QVCQKDMELA QRVLEEGTPA VFKLNSQMVE PATHCAWAER
LLLQAELYGV CCEQLNGCDC TPNVS