Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1006 |
Symbol | |
ID | 3707398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1112605 |
End bp | 1113582 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637737511 |
Product | ATP/GTP-binding protein |
Protein accession | YP_343044 |
Protein GI | 77164519 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.949119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACCTGT CACAACTCCA GAGCACTCAG TCGACGGTAA AAACTTATCT GGCGCAGGCC CAAATACCCC ATTATATGGA ACTGGGTGCT ACCCTTTATA TGCCTGCTAC GCGGAAAGAT ATTGCAAGAG TTCTCAATCA ACAAAAGCTG ACTGGTTTGC GTTCGGCGGT GGTATGCACT GAAGATTCCA TCTTGGAACA AGATCTATCT CCTGCGCTCG CTAATTTACG GTTAGTATTA GAGCAACTTC GCCCTTCCTC CATGCTGCGT TTCATTCGTC CTCGCAACCT CGAGGTATTG TCTCAATTGA TGCGTATCCC TGAAATTAGA AGGATAGATG GATTTATATT GCCTAAGGTA GACGAGAAGA ATCTGCCACT TTACGCAGAA CTGGCTGCCC GGATTCCAGA GCTACTTTTG ATGCCTACGC TTGAGACTGA GATGGCTTTT AGTCGGCAAC GGCTTGAGGC ACTGCGTAAG GGACTTGCTA AGGTGAGCAA TCCCATTTTA TGCCTTCGGA TTGGTGGTAA TGATCTCCTG CGTTTGTTGG GGTTAAAGCG GCCTAAACAT TTGACAATAT ACGATACGCC GCTGCGGAAC ATCATCAATG ATGTCATCCT GACTTTCCGT CCAGCGGGTT ATGGGCTTTC TTCTCCGGTT TTTGAGTATC TTGATAACTA TGCTACTTTG CAGCGTGAAG TAGCGTTGGA TATTGTCCAT GGCTTGCTCA CGAAGGCAGC CATTCATCCT AGTCAAATTC CAGTGGTGGA AAGGGCCTAT CAGGTCTGTC AAAAAGATAT GGAGTTAGCG CAGCGCGTCC TTGAGGAAGG AACGCCAGCC GTTTTTAAAC TTAATAGCCA AATGGTTGAA CCGGCTACCC ATTGCGCATG GGCGGAACGG CTGCTGTTAC AAGCCGAGCT GTATGGTGTC TGTTGTGAGC AGCTGAACGG GTGTGATTGT ACTCCCAATG TTTCTTGA
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Protein sequence | MYLSQLQSTQ STVKTYLAQA QIPHYMELGA TLYMPATRKD IARVLNQQKL TGLRSAVVCT EDSILEQDLS PALANLRLVL EQLRPSSMLR FIRPRNLEVL SQLMRIPEIR RIDGFILPKV DEKNLPLYAE LAARIPELLL MPTLETEMAF SRQRLEALRK GLAKVSNPIL CLRIGGNDLL RLLGLKRPKH LTIYDTPLRN IINDVILTFR PAGYGLSSPV FEYLDNYATL QREVALDIVH GLLTKAAIHP SQIPVVERAY QVCQKDMELA QRVLEEGTPA VFKLNSQMVE PATHCAWAER LLLQAELYGV CCEQLNGCDC TPNVS
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