Gene Noc_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1004 
Symbol 
ID3707396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1110711 
End bp1111454 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content50% 
IMG OID637737509 
Producthypothetical protein 
Protein accessionYP_343042 
Protein GI77164517 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCGTT CCGTATTCAT CTTTTCTGAT CTAGATGATA CTTTGTTGCA GACTCAACGC 
AAATGCGGGG TATCGGGTCC ATTAACGGAG GCGGCGGTCG ATAGAGAAGG CCGTCCCTTG
TCTTTCCACT CCCAGGAACA ATTATTGTTG TTGCGGCTCT TTAAAGCTTG CACTTTGATT
CCCGTGACCG GACGCAATTT AGAGGCGTTG GGTCGAATTC GCTCACCCCT CTTTTCCAGC
TATCGGGTCA CTAGTCACGG TGCATTGGTT TGGGATGCCA ATAATGCTTT AATCCCGGAG
TGGGAGAGCA CCATTAGGGG AGAGGCGCTG ATTTGGGAAC CGCGGATGCA ACGTCTTCTT
GCGGTAATGG AGGGCTATCA GCGGGCGGAG CAGGTAGAAA ATTTGCGGTT TCGTATTATT
TATGATGCAC AGATACCTGT CTATCTTTCT ATCAAGGGTA GCCCCGGACA GCTTTCAGCA
GTCGAGGAGA TAGTGGCTCC AGTTTGGGTC CAGGAAATGG GAGGAAAATT TCACCGCAAT
GACCATAATA TGGCGCTCCT TCCTCCTTAT GCGGATAAGG GCAGGGCTGT GAAATACATC
ATGACGCTGA TCCGCCAACG TTGTGAAGGG CCACCGTTAT TTATTGGTAT GGGTGACAGC
TTGACCGATA TTCCTTTCCT CCGTGCTTGC CATTACGCGC TTACACCGCA AAATAGTCAA
ATTCAACAGG AAGCTTGGAT GTGA
 
Protein sequence
MERSVFIFSD LDDTLLQTQR KCGVSGPLTE AAVDREGRPL SFHSQEQLLL LRLFKACTLI 
PVTGRNLEAL GRIRSPLFSS YRVTSHGALV WDANNALIPE WESTIRGEAL IWEPRMQRLL
AVMEGYQRAE QVENLRFRII YDAQIPVYLS IKGSPGQLSA VEEIVAPVWV QEMGGKFHRN
DHNMALLPPY ADKGRAVKYI MTLIRQRCEG PPLFIGMGDS LTDIPFLRAC HYALTPQNSQ
IQQEAWM