Gene Noc_1000 details

Gene Information

• Locus tag: Noc_1000
• ID: 3707392
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 1107536
• End bp: 1108075
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637737505
• Product: hypothetical protein
• Protein accession: YP_343038
• Protein GI: 77164513

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0163716
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGCAT GCTCAAAAAA GATAATAGGG ACCATACTGG CTTTCTTAGC TTGGGGCCAT 
ATTGCACTAG CGGAAGATTC CCAGTCTGCC GCGTTCAGCC TGGGCGATAT TGAATTTCTT 
GCCGATGAGC CAAGCTACTT GGACTTTGGG GCTGGCGCCT TTAACTTTAG TGATGATCCC 
ACCGCTGCCG GTTATATTGA ATACCGTTAT GGGAAGAAAC TATCTTTCAT CGGTCCCGTT 
ATGGGAATAA TGGCGAATAC GGACGGCGGT GTTTTCGGCT ATGGTGGTTT TTATGCTGAT 
CTCAAATACC GACGTTTAAT CGTTACCCCA CTCGCCACCG TGGGAGGATA TCACCAAGGC 
GGGAGTAAAG ATCTTGGAGG AATTTTTCAA TTTCGTACCG CCATTACTTT TGCCTATCAA 
TTTGATGGCG ACTCCCGCCT TGGGGTGCGC CTCTCTCATA TCTCCAACGC CGGTCTCCAT 
GATGATAATC CCGGCGAAAA CGAAATACTT TTGACCTATT CGCTACCCTT AGCTTTTTAG 

 

Protein sequence

MKACSKKIIG TILAFLAWGH IALAEDSQSA AFSLGDIEFL ADEPSYLDFG AGAFNFSDDP 
TAAGYIEYRY GKKLSFIGPV MGIMANTDGG VFGYGGFYAD LKYRRLIVTP LATVGGYHQG 
GSKDLGGIFQ FRTAITFAYQ FDGDSRLGVR LSHISNAGLH DDNPGENEIL LTYSLPLAF