Gene Noc_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0983 
Symbol 
ID3707414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1085862 
End bp1086860 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content45% 
IMG OID637737489 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_343022 
Protein GI77164497 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00638264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCATA ATAATTTGTG TTTATTTGCT CTCGGTATGG GTACTTCCTT TGGTCAAAAA 
GTAAGTGAAA GGCTAGGTGT GGCCTTGTCC AGGTGCGAGG AAAGGGATTT TGAGGATGGT 
GAGCATAAAA TCCGCTCTTT AGTTAATGTG AGGGAAAAAG ATGTATTTGT TATTCAACCC 
CTTTATAGTG ACTCGCGGCA GAGTGTTAAT GATAAATTAT GCCGCTTGCT GTTTTTTATC 
GGCGCCTTGA GAGATGCTTC TGCCAAACGA GTGACGGCGG TACTTCCTTA TCTTTGCTAT 
GCCCGGAAGG ATCGAAAAAC CCAATTCCGC GATCCGGTGA CTACCCGTTA TGTGGCCAAA 
CTATTAGAAG CGGTTCAGAC TGATCGGGTG CTGGCTATGG ATGTCCATAA TCTGGCCGCT 
TTTCAGAATG CTTTTAATTG CCGGACTGAT CATTTAGAAG CACAAAAGTT ATTCGTTGAT 
TATTTTTTGT CTTCTTCGAT ACTCTCAGAG CGTGATAAGG TGGTAGTCGT TTCGCCAGAT 
GCAGGTGGAA CGAAGCGGGC GGAGCAGTTC CGGGAAGCAT TGAGCAAGGC TCTGGGAAAA 
GAGGTGACTA CAGCTTTTAT GGAAAAGCAA CGTAGTGGCG GTGTGATAAG GAAGGGTGGG 
GCCATGGCAG GCGAAGTCAA AAATAGGATT GCCATCATTA TCGATGATTT AGTGAGCACC 
GGCACAACTT TGAATCGGGC TGCTGAAGTT TGCCAGGAGC GGGGAGCAAA AAAAATCTAC 
GCTGCGGCCA CTCATGGCCT CTTTGTGGGG CAGGCTAATG AAATTCTAGC GGCTTCTGCT 
TTGGAAAAGG TGATCATTGC AGATACTATT CCTCCTTTCA GATTGAATGA AAAAATAATT 
AAGGAGAAAT TACAGGTAGT GGATTCAGCC AGGTTATTTG CGGATGCCAT TCAATGCGTT 
CATTCAGGGA ACTCACTTAT TGAATTATTA GAAATTTAG
 
Protein sequence
MSHNNLCLFA LGMGTSFGQK VSERLGVALS RCEERDFEDG EHKIRSLVNV REKDVFVIQP 
LYSDSRQSVN DKLCRLLFFI GALRDASAKR VTAVLPYLCY ARKDRKTQFR DPVTTRYVAK 
LLEAVQTDRV LAMDVHNLAA FQNAFNCRTD HLEAQKLFVD YFLSSSILSE RDKVVVVSPD 
AGGTKRAEQF REALSKALGK EVTTAFMEKQ RSGGVIRKGG AMAGEVKNRI AIIIDDLVST 
GTTLNRAAEV CQERGAKKIY AAATHGLFVG QANEILAASA LEKVIIADTI PPFRLNEKII 
KEKLQVVDSA RLFADAIQCV HSGNSLIELL EI