| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0920 |
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| Symbol | |
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| ID | 3707310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1013198 |
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| End bp | 1018066 |
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| Gene Length | 4869 bp |
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| Protein Length | 1622 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737428 |
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| Product | superfamily I DNA/RNA helicase |
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| Protein accession | YP_342962 |
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| Protein GI | 77164437 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAA GCCACCTCCT CGTGAACGAT CAACCGGTAG GTCACCCTGC TAATCAAAAG
GTTGTTCGCC TTATCCACTA CTTGACGCGT CTTGCTTCTC TCCGCTCAAA ACTAATTCGA
GATCTTACTG AATACGAAAA AATTCTGTGG ATATCAGACG TTCCCCATGA GCACGGCTGC
TTCACGCGGG CATGGGGCCA AGAGGAAGAA AAGGAACTGG ACGAATGGCT GGCAGTGCAA
AACCGGCGGG AACCAGAGCT GCCTATTATT CCAGAACAAT GCAAAGAATG GGTGAATCAG
GCAACCCTTC GCGAAAAGGA CCGCTTGCCC GAGCTTCTTC CCGAGATCAT TCGGCAAAGC
CAAGATCCTG ATGGGCGTAA AGAGTTGGAT CGGCCAGCAA CCATCTCAAT GACCGAACGT
CTCGAGGAAC ACCCGGGCGT TCAACAAGCA TGGAATCGGT ATCTCGAAAA CAAATGGCTG
CCATGGATGG AGGAGCATAA TATATGGGAA CAAATCCACA AGGTCTATTC GGCGCTTTTT
GCTATTCATC AAGCGCAACT CCGCCTAGGC GAGGAATATG AACTGGTGCT CGGTTTGGGG
CTGCTGACCT GGCAGACGCC TACCGGGCAA CACGTTCGGC GGCACTTGGT TGTCGCCAAC
GCCCTCCTGG AGTTTGAGGC CCGCCTGGGT AAATTTACTG TCCGTCCCTA TACAGAAAGC
GTAGAATTGC GCCCTGAACT CGATATGCTC GATATCGAGG AACGACCGGC GCACGCAGAG
GAAACCGCAA AATCTTCATT GAGCGGAGCC GAAGACGATC CATGGGCAAA AGAGCGCATC
GACAGCGTAC TTCAAGCCTT GGTGCATTCC ATTAACTCCC AGGGCACTTA TGATGATTCT
CTGGAGATGA AAAACATCCG CGCTTCGGCA AGGCCCGTCG TAGAATATGC GCCTGCCTTG
ATTTTGCGAA AACGCTCCAC CAAGGGGCTT AGCGAAATTT TAGGACGAAT TAAAAAGCAG
ATCGAAAGCG ATGAAAATGT TCCTAGCGAG TTCGCGGATC TGGCCGAAAT CAGCGCGCGG
GACGAACGAG AGCTAGATAA CGACGGGCTA GAAGGTCTTC GCGCAACGTT CAATGGAGAA
GTCTACTTCC CAAAGCCATC AAATGATGAG CAGCGTCGCA TCATTGACAA GCTCCGGTCG
GCAAATGGCG TTCTTGTGCA GGGGCCGCCG GGAACCGGAA AATCCCATAC CATCGCCAAT
TTAATATGCC ATCTGCTTGC CACCGGGCAG CGTACGCTGA TCACAGCCAA AACTCCACGT
GCGCTTAAGG TTCTTGAGGA ACTCGTTCCC GGTGGATTAC GTCCACTTTG CATTAATTTG
CTTGGCGACG GCCCTGAGGA AAGGCGTTCT CTTGAAGCTA GCGTTGGCGG CATTCTCCGA
AAAAGCGAAG AATGGGAAGA GGAGGATGCT GAACGGCAAC GCGAGGAACT TGAAACGCGT
CTCCAGGAAC TCCGCGAGGA AAAGGCGAAA ATCAACCGCC GCCTCCACGA TATCCGGGAA
GCCGAAACAC ATCCACAATC CGTCGCGGAA GGAACCTACC GCGGAACAGC GGCCAGGATA
GCCGAATCCG TCAACAAAAA TCGAAGCACC TTCGGTTGGT TTACGGATTC TGTACCTCTG
GATAAGACAT TGCAGATATC TGAAATCGAT CTACGCGAGA TTCTGATGGC CCTGCGCCAT
TTCACGCCGG AGAAACGCGA AGAATTGAAC CTTGCCTGGC CTGACTCTGT GCCCTCCTCT
GAACGCTTTG TCCAGCTCGT ACAGAACGAG GCGAAAGCCA GCGAGGAAGA GCGCCGCTTG
GCGGATAGGG CCGATGACCA CGTGGCCGAT CTGCTGGCAA ACCATAGCTC CGCTACCATC
GAAAATATTC GGGACGCACT TGCCCGTTTT CGGGACACTC GACGAAAATT GATAATGGCG
AGTCATTCAT GGATGAAGGA GGCGCTGCGC GATATCTTGA GCGGTAATTC TGCTCTGTGG
CGCGAGCTTT TCCGGGTTAC GGACCACGCT ATTTCGGAAG TCGAAGGACT TGTCGCCATC
GCGGATAATA CTAGCATCGA ATTTCTCGAA TCCATTGATA TCAGGGTGCT GCGTGAGGAT
GCCCGCAAGC TGAAAGAGCA CATGGAAAGT GGCGGAAAAC TAGGCTGGGG ACCGCTTCGG
TCCAAACGGG TGAAAGAGCG GCTTTATGTA ATCAAATCGG TAAAGGTCGA TGGACGTTCT
TGTTCTACAA TCGAGCATTT CTCGATTCTT GCCGCCGTGC TACACGTATA CATTGAGTGC
GAGAAGGCAT GGGGGTTTTG GGCAGGCCAG GGCGACAAAT CTCAAGAACC CTATGTGCTG
CAACTGACCA TGCTTAAATC ACTGCGTGGC GCGCTCGAAG AAGCCTTGTC CCTTCAAGGC
ATTATTGACA AGTGCCGTAA AGCGGTACAA GAGTGTCCGG CTCTGGATGA GCCTTCATGG
AACGATGAAT CTAAAATTGA AAGGATCATC GCCTCATGCC GCCTCGCATT GGCCCGTATC
AGCAAGCAGC TTGCCGCCGC AGAACTCCAA GGCATTGAAA CGCCGATTTC TCGGATTGCC
GCCGGGGGCA ATGCGCATCC AGTCACCATT CATGTGTTGC ATGCAATTCG AGATCGCGAG
CGCGATGGAT TTGCGCAGTG CATGAGCAAA ATCCAGGACT TGGAGAAACA ATATCAATAC
CTGCTAAAAC GGGATGAGGA TCTCTCCAAA CTCCGTCAGC TACTTCCGCA GCTTGCCGAT
TGCCTAGAAC GTACCTGCAA CGAGCCCTAC TGGGAGGAAC GAGTCCGGCA TATTGGTAAC
GCTTGGCATT GGGCGCAGGC GCGGTACTGG ATTGGGGATT ATATCAGGCG GGAAGACGTT
CCAGCGCTCG GCAAACGCGT CAAACAGATT GACGATACCA TTAATGACAT TATTGCAAAA
CTTGCCTCGC TTCATGCCTG GTCCTTCTGT TTTTCGCGGC TTACGGAAAG CCACCGGCGT
CACATGGAGG CTTGGCAACA ATCTATGCGA CGGCTTGGTA AAGGAACAGG AAAGCATGCG
CCGCGCCATC GCCGCGAGGC CCAGGGGCAT TTGAATGAAT GCCGTGAAGC GGTTCCGGCC
TGGGTGATGC CGCTTCATCG GGTCTGGGAC ACAGTATCTC CCACGCCAGG TATGTTCGAT
GTAATTATTG TTGATGAGGC ATCACAATGC GGTCTTGAAG CGCTTCCACT GCTTTATTTG
GGAAAAAAAG TAGTGATCGT TGGAGACGAT AAGCAGATTA GCCCCGAGTC CGGTTTTGTT
GGCAAGGAGG CAATGTTTCA GTTAATGGAA CAGTTCCTTT ATGATTTCCA ATATAAGGAT
TATTTCCATC ACGATGCTAG CCTGTTTGAT CACGGAAAGT TGCGCTATGG GACACGTCGG
ATTACGTTGC GGGAGCATTT CCGCTGTATG CCAGAGATCA TTCGATTCAG CAACGATCTT
TGCTACTCGG ATACGCCCCT TATTCCCCTG CGGCAATATA GTTCAAACCG CTTACCACCG
CTTGAGCATG TATTCGTGAC TGGAGGATAT TGCGAAGGTT CTAAAAATCG TACGATTAAC
CGCCCAGAAG CCAACGCCAT TGTTACCAGA ATCGCCGAGT TATGCAAGGA TAGCCGGTAC
GATCACAAGT CAATGGGGGT AGTTGTGCTT CAAGGAGAAG CGCAGGCATA TTTGATTGAA
AATCAACTGG CCAAGCGATT AGGCCCCGAG GAGATGGAGC GGCGTCGCTT GGTCTGTGGC
AACCCTTACA GCTTCCAGGG AGACGAACGC GACATTATGT TCCTATCGCT TGTTGCCGCC
GCCAACAAGC GAATTGGCCC CCTTACCAAA GCAGCAGATG AAAGGCGATT CAATGTCGCG
GCCAGCCGTG CCCGCGACAA GATGATTCTT TTTCATTCTG TCACCTTCGA GGATCTCAGC
GCCTCTTGTC TCCGACGACG GTTGCTTGAG TTTTTTGCGA ATACGCAACC ACAACAAATT
GCCGGTATCG AGCGGGATGA ACTGGAGCGG CGGGCGGCCC AAGATAATCG GCGTATCGTA
AATCCCCCCG CACCCTTTGA CAGTTGGTTC GAGGTTGATG TTGCCTTGGA GCTGCTGCGG
AAGGAATTCC GCATTCTTCC CCAACATGAA GTTGCAGGCA GGCGAATTGA CCTTGTGGTT
GAAGGTGGAC AAGCGCGCTT GGCGGTCGAG TGCGACGGAG ATCATTGGCA TGGCGCTGAT
CGTTACGAAG CCGATATGCA ACGCCAGCGG CAATTGGAAC GATGCGGCTG GGAGTTTTTC
CGCGTTAGGG AATCAGCTTT CTACGCCAAT AAAGATGACG CGCTTGCAAG CCTCTGGCGT
ATGTTAGAGG AACGAGAAAT TTTTCCCATC TCACAGTGTG TGGATTTAAC CCCCAAAGTC
AATATGGAAG AAGAGGGTTA CAACAAATCC GACAGTGATG CTTCCGCAGC TGACCATGCA
AGCTATTCGT TAAATAACGT GGAGAAAAGT ATTCATCCAT CAGGTCGCCG ATCGGAGGAG
ATAACCCCAT CGGAAATAGA GGATGCGATT CTGCAAGCTT TGTCGAAGCG TCCGAATCAA
TCATGTACGC TGGACTCACT TACTGCCCGC GTGCTCAAAG AGATAGGCGT ATCGACACGC
GGAAAGCCCC GGGAGAAATT TGAACGGCGT ACACTACAGG GCGTCAACCT CCTTAAAAGA
CGTGGCCGCA TAGAAACTTA CAAAGCAAAA AACCAGAGGC TGAGGCTTAT TCATCAAGAA
AAAACTTAA
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| Protein sequence | MNTSHLLVND QPVGHPANQK VVRLIHYLTR LASLRSKLIR DLTEYEKILW ISDVPHEHGC
FTRAWGQEEE KELDEWLAVQ NRREPELPII PEQCKEWVNQ ATLREKDRLP ELLPEIIRQS
QDPDGRKELD RPATISMTER LEEHPGVQQA WNRYLENKWL PWMEEHNIWE QIHKVYSALF
AIHQAQLRLG EEYELVLGLG LLTWQTPTGQ HVRRHLVVAN ALLEFEARLG KFTVRPYTES
VELRPELDML DIEERPAHAE ETAKSSLSGA EDDPWAKERI DSVLQALVHS INSQGTYDDS
LEMKNIRASA RPVVEYAPAL ILRKRSTKGL SEILGRIKKQ IESDENVPSE FADLAEISAR
DERELDNDGL EGLRATFNGE VYFPKPSNDE QRRIIDKLRS ANGVLVQGPP GTGKSHTIAN
LICHLLATGQ RTLITAKTPR ALKVLEELVP GGLRPLCINL LGDGPEERRS LEASVGGILR
KSEEWEEEDA ERQREELETR LQELREEKAK INRRLHDIRE AETHPQSVAE GTYRGTAARI
AESVNKNRST FGWFTDSVPL DKTLQISEID LREILMALRH FTPEKREELN LAWPDSVPSS
ERFVQLVQNE AKASEEERRL ADRADDHVAD LLANHSSATI ENIRDALARF RDTRRKLIMA
SHSWMKEALR DILSGNSALW RELFRVTDHA ISEVEGLVAI ADNTSIEFLE SIDIRVLRED
ARKLKEHMES GGKLGWGPLR SKRVKERLYV IKSVKVDGRS CSTIEHFSIL AAVLHVYIEC
EKAWGFWAGQ GDKSQEPYVL QLTMLKSLRG ALEEALSLQG IIDKCRKAVQ ECPALDEPSW
NDESKIERII ASCRLALARI SKQLAAAELQ GIETPISRIA AGGNAHPVTI HVLHAIRDRE
RDGFAQCMSK IQDLEKQYQY LLKRDEDLSK LRQLLPQLAD CLERTCNEPY WEERVRHIGN
AWHWAQARYW IGDYIRREDV PALGKRVKQI DDTINDIIAK LASLHAWSFC FSRLTESHRR
HMEAWQQSMR RLGKGTGKHA PRHRREAQGH LNECREAVPA WVMPLHRVWD TVSPTPGMFD
VIIVDEASQC GLEALPLLYL GKKVVIVGDD KQISPESGFV GKEAMFQLME QFLYDFQYKD
YFHHDASLFD HGKLRYGTRR ITLREHFRCM PEIIRFSNDL CYSDTPLIPL RQYSSNRLPP
LEHVFVTGGY CEGSKNRTIN RPEANAIVTR IAELCKDSRY DHKSMGVVVL QGEAQAYLIE
NQLAKRLGPE EMERRRLVCG NPYSFQGDER DIMFLSLVAA ANKRIGPLTK AADERRFNVA
ASRARDKMIL FHSVTFEDLS ASCLRRRLLE FFANTQPQQI AGIERDELER RAAQDNRRIV
NPPAPFDSWF EVDVALELLR KEFRILPQHE VAGRRIDLVV EGGQARLAVE CDGDHWHGAD
RYEADMQRQR QLERCGWEFF RVRESAFYAN KDDALASLWR MLEEREIFPI SQCVDLTPKV
NMEEEGYNKS DSDASAADHA SYSLNNVEKS IHPSGRRSEE ITPSEIEDAI LQALSKRPNQ
SCTLDSLTAR VLKEIGVSTR GKPREKFERR TLQGVNLLKR RGRIETYKAK NQRLRLIHQE
KT
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