Gene Noc_0890 details

Gene Information

• Locus tag: Noc_0890
• ID: 3707217
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: -
• Start bp: 970552
• End bp: 971148
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 637737393
• Product: hypothetical protein
• Protein accession: YP_342932
• Protein GI: 77164407

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000843822
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCAAT CTAATTCTAT CCGCCACAAA ATCCACTGCT TATGGAAAAT CGCCGGCTTC 
GCCTTGGTTG GTTATACAGC CTTCAGCCCA ATGACATACG CAGCGGATTC ATCTCCAGCG 
CTTTTTAACA TCAATAACGA GCTTCTCCAG CCGGAAGGTT ATAGAGAGTG GGTTTATGTT 
GGCACCACGG TAACACCCCA TGATATGAAC AACGGTAAAG CCGAAGTGCC CGAATTTCAT 
AATGTCTATA TCGATCCGAA AAGTTTTACC CACTGGAAAA AAACTGGCCA ATTTCGAGAC 
GGAGCCATGG TAGTGAAAGA ACTTCTCAGC GTAGGCGCTA AAAAGGCATT GACGGGTAAT 
GGTTACTTTA TGGGGGAGTT TACCGGTTTA GAGGCAGCCG TGAAGGACTC CAAACGATTT 
CCCGACGAAC CAGGCAACTG GGCCTATTTT ATGTATGGAA TGAAATACCC TTTACCACGT 
AAAGCTACGG CTAAACCTAC TGCTGAATGC AATGCATGTC ACCAGGCCAA CGCCAAAGAC 
GATTGGGTTT TTACTCAATA TTATCCGGTT CTTCAAGCCG CAAAGCCCAA TAAGTAG 

 

Protein sequence

MNQSNSIRHK IHCLWKIAGF ALVGYTAFSP MTYAADSSPA LFNINNELLQ PEGYREWVYV 
GTTVTPHDMN NGKAEVPEFH NVYIDPKSFT HWKKTGQFRD GAMVVKELLS VGAKKALTGN 
GYFMGEFTGL EAAVKDSKRF PDEPGNWAYF MYGMKYPLPR KATAKPTAEC NACHQANAKD 
DWVFTQYYPV LQAAKPNK