Gene Noc_0835 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0835 
Symbol 
ID3707140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp913085 
End bp913855 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID637737337 
Producthypothetical protein 
Protein accessionYP_342878 
Protein GI77164353 
COG category 
COG ID 
TIGRFAM ID[TIGR03172] probable selenium-dependent hydroxylase accessory protein YqeC 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.225401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAATCA GCGAATCTAA CTCACTGTTA AACGCCCTAG AAATTGAGCG CGGCATCGTT 
TGTTTAACGG GCGCGGGAGG CAAAAAAACT ATTCTCTATC GCTTAGCGAT GCTCCACCCA
GGCCGGGTAG GAATTACTTC GACTACCCCT ATCCCCCCCT TCCCAGACAA AGTTTCTGCT
TATCAAGTCA TTACCGAGGA AAAGCTACTA CTTACCCTGG TAAGCACGGC AGCCAAGACC
CACCGGCTGA TTGCTTATAC TCAGCCTTCC GTAAAAAAGG GGTACTTAGA CGGTATCCCT
CCCCCTCTAG TGGCAATGAT CCATCGTCAA GCAGGTTTTG ATATCAGTTT AGTAAATGCT
GATACAGCAC AGGGCTGCTG GATCAAAGCT CCAGGTAGGG AAAAAATAGC GATCCCAGAA
CAAGTAACCC ATGTAATTCC TGTGCTTTCC GCACTTGCCC TTGGCCAGCC TTTGTCTGAA
GATATTGCCT GTCAGGCAGA AAGAATTCAA ACCATTATCA GAATTAAAGT GGGCGAAATC
CTAAAACCCG TTCACTTAGC AAGACTCTTA GCCAACTCTG CAGAGCAACT GAAAGGGGGG
AGAAAAGTTA AAATCGTTCC CCTCATCAAT ATGATCGATG GTCCAACATG GGAAACACAA
GGAGCGGCGG CCGCGAAGAT AGCCCTAAGC CTCACAGATC ATTTTGACCG AGTGGTACTT
ACCCGTATGA ACTGCCCTAA CCCCTTAGTA AGGATGGTAC ACCGGCACTA A
 
Protein sequence
MIISESNSLL NALEIERGIV CLTGAGGKKT ILYRLAMLHP GRVGITSTTP IPPFPDKVSA 
YQVITEEKLL LTLVSTAAKT HRLIAYTQPS VKKGYLDGIP PPLVAMIHRQ AGFDISLVNA
DTAQGCWIKA PGREKIAIPE QVTHVIPVLS ALALGQPLSE DIACQAERIQ TIIRIKVGEI
LKPVHLARLL ANSAEQLKGG RKVKIVPLIN MIDGPTWETQ GAAAAKIALS LTDHFDRVVL
TRMNCPNPLV RMVHRH