| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0704 |
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| Symbol | |
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| ID | 3706952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 756326 |
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| End bp | 759601 |
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| Gene Length | 3276 bp |
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| Protein Length | 1091 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637737207 |
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| Product | ATP-dependent dsDNA exonuclease (SbcC) |
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| Protein accession | YP_342748 |
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| Protein GI | 77164223 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.859038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAC GGCAGGTACG CTTTAAGAAT CTGAACTCAC TGGTCGGCGA GTGGGAAATC
GACTTGACGC ACCCAGCCTT CGTGTCTGAT GGCATCTTCG CCATTACAGG CCCTACTGGC
GCGGGCAAGA CGACTATTCT CGATGCCATT TGTATGGCTC TTTACGGGCG GACGCCTCGC
CTAAACAAGG TCACTAAGCG TGGCAACGAG ATTATGTCCC GCCAGACCGG CGAATGCTTT
GCAGAGGTGA CCTTCGAAAC CCAGACTGGG CGTTACCGCT GTCACTGGAG CCAGCACCGG
GCACGCAAGA AGCCTGATGG CGAGCTCCAG GCTCCGAGAC ACGAAATTGC CAATGCCGAT
TCCGGTGAGA TTTTCGAATC CAAAATCAGA GGGGTCGCGG ACCAGATCGA GTCGGCTACC
GGTATGGATT TCCACCGTTT TACCCGCTCC ATGTTACTGG CCCAGGGCGG CTTTGCCGTG
TTCCTCCAAG CGGTGCAGGA TGAGCGGGCG CCGATCCTTG AGCAGATCAC GGGCACGGAG
ATTTACAGCC AGATTTCCAT CCGTGTTCAT GAGCGCCAAC GGGAAGAGCG GGAAAAACTG
AACCTGCTTC AGGCTGAAAC GGAAGGCATC GTGATGCTTG AGCCGGAACA GGAACAAGAG
ATTGGGCAGA CGCTTGAGAT AAAGCGGAAG GAAGAGGCAG ACCTTACCGC CAAGTTCGCC
GACACTGGGC AGGCCATGGC CTGGCTCACC ACCATCGATG GTCTGAAGAA GGAAATCGTC
AACCTGGCCG ATGAGGTGCG CAAGCTGCAA AACGATATCG AGGCGTTCAG ACCGGATCGT
GAAAAGCTCA ACCGGGCTTT GAGTGCTGCC TCACTGGACG GCGCATACGC AACGCTCACA
GCCATCCGCA AACAGCAGGT GGAGGACAGA GAAGCCTTGA AAGCTGAGGG AGAAGCGCTT
CCTGGATTGG AATCCTCCGC CAAGGAGCAG GCCGAGTCAC TAAAATCGGC TGAGCAACAA
ACCGCTCGGG TCAAAGAAGA GCTAAAAGTT GCCGCACCTA CCTTGCAGAA GGTTCGCTCC
CTGGATCAGG AGCTCGCCAA TCTCAAAAAA ACTGCGGCAG AAGATAAACA GGATTGCCAA
CAGGATCTTG AAAAGATTGA TACAGACAAA CAAGCCCGGC TTGAGGAGCA GGAAAAACGT
TCCACGGCTC ACGGGAATCT GGAACTTGTT GACAGCTACC TCAAGGAGCA TGCACAGGAT
GAATGGCTGA TCAGCGGCCT GGCTGGTGTG GAAGAACAGG TGAGCAGCCT ACTCTCCAGG
CAAAATGAAA TCCATCAAAA AGAGATTGAC CAGGATAAGG CCGCGAAAGC CTTGGAACAG
GCGACAAAGT CACTCGACGA TTGTCAGAAG CAATCTGACC TTCGGAAGCA GGCGCTGGAG
GACTCATCCA AACAGCTTCA GCAGGGCAAA GATGCTTTGA GCCAGCTACT GGGGAACCGC
TTATTGCGAG AATACCGCAC CGAGAAGGAA ACCCTGCTGC GTGAAATGGC CTTCCTGGCG
AAAATAGCGG AGCTTGAAGA TCACCGGGCA AAACTGGAAG ATGGCAAGCC CTGTCCACTT
TGCGGCGCAA CCGAGCATCC CTTCGCGGCA GGCAATGTCC CTGTTGCCGA TGAATCCGAA
CAGAAGATCG ACGCGTTGAC CAGGCTGATC AGCGAAGTCG AGGATCAGGA AACCGCCATC
AAGGAACACG AAAAAGCTGA AAGCTTGGCC CATAAGGACC TGACGGAGGC TGAAAAACAG
GAGTCAGCAG CAGCTAATGG CAGGAAGGTT GCCGAAAAAG CCCTTGCCGA AGTGACGGAC
AGCTTGGAAA AACTCCGGGC TGATTTTGCT GAACGCAGGC AGGCCGTTGC TGCCAAACTT
CTGCCCCTTG GTATCACGGA CATCCCTGAA ACGGATATTT CATTACTACC CGAAATCCTC
AGAGCACGAC TGAAGGCGTG GCAGGCCCAG GTCAAGAAAA AGGCGGATAT TGAGAAACAG
ATTACCGACC TCGACAGCGA GGTGAAACGG CTGGATGCGG TCATTGAAAC CCAAAGCACC
GCTCTGGCCG AAAAGCTGAA GCGCCTGGAG AGCTTAAAGA AGGAACTCGC CACCGTGAGT
GATGAGCGAA ATGCACTGTA CGGCGGCAAG AATCCCGACG ATGAGGAGCG CTGCTTGAAC
AAGGCGGTTG CTGATGCGGA AGGCGTCGAA AGGTGGGTCA GAGAGCAGCA CAATGAACTC
CAGCAACAAT GGAAAACCGG GAAGGCCCTT GTCGAATCGT TGAAGAAAGG CATTGACCAA
CGAGAGCCGG AACTGAGTAG GCTGGAAACA GAATTCTTCG CAGCACTTGT GTCCGTGGAT
TTTTCAAATG AAGAACAGTA TCTGGCAGCC CTATTGTCTT CAGAGCGGAG GGCTGAGCTG
GTGACTACGG CCAAGGATCT GGATGATTGC CAAACGGACC TCAAGGCTAG GCAAAAAGAT
CGGGAAACGC ACTTGGCTAC GGAAATGGCC AAAAAGGTTA CTGACCAATC TATTGAGGAA
CTGGAGTCGC AATCCAAGGA GTATGAAAAC ACACTGAAAG AGCTGCGAGA TATCATTGCC
AGTCTTAAGC ATAAGCTCAG TGAGAATATG GCTGCCAAAG AGCGGCTAAA GGAGAAGCAA
GGGGCTATCG AAGCCCAGAA AAAAGAATGT CGCAGGTGGA AGAACCTGCA TGAATTAATC
GGCTCCGCAG ATGGTAAGAA GTACCGCAAT TTTGCCCAGG GGTTGACCTT TGAAGTGATG
GTTGGCCATG CCAACCGGCA ACTGCGGAAA ATGACTGACC GTTACTTGCT AGTCCGTGAC
GAGGCTCAGC CCCTGGAGCT CAACGTGGTT GACAATTACC AGGCTGGGGA GATTCGGTCC
ACGAAGAACC TTTCCGGCGG TGAAAGCTTT ATCGTCAGCC TGTCCCTGGC GCTGGGTTTG
TCCCATATGG CCAGCAAGAA TGTCCGGGTG GACTCGCTGT TCCTGGATGA AGGCTTCGGC
ACCCTGGACG AAGAAGCCCT CGACACCGCC TTAGAAGCCC TTGCGGGCCT GCAGCAGGAT
GGCAAGCTGA TCGGGATCAT TTCACACGTA CCTGCCTTGA AAGAACGGAT TAGCTCCCAA
ATCCAGGTAA CACCTCAAAC CGGTGGCAGG AGCAAGATAT CGGGGCCTGG ATGCGGTGGG
TTGAGTGCTG CAAAATGGGC CAAAGAAGCG GGTTAA
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| Protein sequence | MRIRQVRFKN LNSLVGEWEI DLTHPAFVSD GIFAITGPTG AGKTTILDAI CMALYGRTPR
LNKVTKRGNE IMSRQTGECF AEVTFETQTG RYRCHWSQHR ARKKPDGELQ APRHEIANAD
SGEIFESKIR GVADQIESAT GMDFHRFTRS MLLAQGGFAV FLQAVQDERA PILEQITGTE
IYSQISIRVH ERQREEREKL NLLQAETEGI VMLEPEQEQE IGQTLEIKRK EEADLTAKFA
DTGQAMAWLT TIDGLKKEIV NLADEVRKLQ NDIEAFRPDR EKLNRALSAA SLDGAYATLT
AIRKQQVEDR EALKAEGEAL PGLESSAKEQ AESLKSAEQQ TARVKEELKV AAPTLQKVRS
LDQELANLKK TAAEDKQDCQ QDLEKIDTDK QARLEEQEKR STAHGNLELV DSYLKEHAQD
EWLISGLAGV EEQVSSLLSR QNEIHQKEID QDKAAKALEQ ATKSLDDCQK QSDLRKQALE
DSSKQLQQGK DALSQLLGNR LLREYRTEKE TLLREMAFLA KIAELEDHRA KLEDGKPCPL
CGATEHPFAA GNVPVADESE QKIDALTRLI SEVEDQETAI KEHEKAESLA HKDLTEAEKQ
ESAAANGRKV AEKALAEVTD SLEKLRADFA ERRQAVAAKL LPLGITDIPE TDISLLPEIL
RARLKAWQAQ VKKKADIEKQ ITDLDSEVKR LDAVIETQST ALAEKLKRLE SLKKELATVS
DERNALYGGK NPDDEERCLN KAVADAEGVE RWVREQHNEL QQQWKTGKAL VESLKKGIDQ
REPELSRLET EFFAALVSVD FSNEEQYLAA LLSSERRAEL VTTAKDLDDC QTDLKARQKD
RETHLATEMA KKVTDQSIEE LESQSKEYEN TLKELRDIIA SLKHKLSENM AAKERLKEKQ
GAIEAQKKEC RRWKNLHELI GSADGKKYRN FAQGLTFEVM VGHANRQLRK MTDRYLLVRD
EAQPLELNVV DNYQAGEIRS TKNLSGGESF IVSLSLALGL SHMASKNVRV DSLFLDEGFG
TLDEEALDTA LEALAGLQQD GKLIGIISHV PALKERISSQ IQVTPQTGGR SKISGPGCGG
LSAAKWAKEA G
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