| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0668 |
|---|
| Symbol | |
|---|
| ID | 3706900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 722919 |
|---|
| End bp | 724361 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637737176 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_342717 |
|---|
| Protein GI | 77164192 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTG ATGCGTGGCT CCCTGTTGGG TACAAATTGC CGGATGGCGC TAAGGTCCGC
GTCGCTGTCT CTGAGGGGGT AAATTGGCAA ATTTGCGAGA CCCACGGCGG TGGGCGAGCG
CTCGTTGTTC AGCACGAACT CGCCAGCCGA TGGATAGATG CCGGGCTGAT CACAGAGGGG
CCGATTAGGT TCTTTGATTT CGGCAACCAG CAATACGGGG CAATCGCTTG CGGTGCAGAC
CAGGTGTTAT GCCCGATTGT AGAGGGAAAC TCGCCGGACA CGAAGGCTGA GGCTTTGTCG
TTCGCGTTGG CGCTGAAGGC GACCCGCGAC ATAGATTCAG ACTCACCGTT ACAGGACGCT
CTATACGTCG AAAAGATCAG CCGCCTTCTA CCTACTTACA GCATTACAGC AAGAACCGAC
GATGATGTAG TACTTGGTTA CTGGCTCACT GGTGGAGCGA CTGTGTCTGC GAAATCGTTT
CGCCGACTTC GTCAGACCAT GAGCTGGCTA AGTGCAAGCC ACCTCCAGGA GGTTGTTCAA
GCTGGTGGGT TCGAAGTCGC TGAAGTTATA CCGGCTGACC GGTCTCGAAG CTTGCCTTCG
CGGCCAGATA ACAAGCAAGC AGAGCGTACC GATCGAAAAG AAGAGCCGCG TGATCAGCAA
CACGCGTCGA AAGCCTTTGA ATTGGCTGGG CGACCTGACC TCGCCGCCTT CTTCAATGAG
CATATCGTTG ACATCATCCA AAACCGTGAT CGTTATAAGG CTCTTGGTAT TGAGTTCCCG
TCGGCCATAG TTTTGCACGG ACCTCCCGGA TGTGGAAAGA CGTTTGCGGT AGAGCGACTG
ATCGACTTCC TCGGTTGGCC AAGCTTTCAG ATTGACGCTT CCAGCGTTGC TAGCCCCTAC
ATTCATGAAA CCAGCAAGAA GGTAGCCGAG GTTTTTGATA AGGCGATGGA GAATGCACCG
TCTGTGTTGG TTATCGACGA GATGGAGGCA TTTCTGGCAG ATCGCGAGAC CGGTTCCGGC
CATCATCGTG TCGAGGAAGT GGCTGAATTC CTGCGCCGGA TTCCAGAAGC TGCAAAGAAC
GACGTGCTTA TTGTCGCGAT GACAAACCGT GTCGATATGA TTGATCCGGC CATCTTGAGG
CGGGGCCGCT TTGATCATGT GGTCAATGTT GACTTTGCCA GCGAAGTAGA AGTGCTCTCA
TTGCTGGAGA AGTTGCTGTC AACCTTACCC AAAGAGGATG ACGTTGACCC GACGCCATTT
GCCCAGGAGC TCGCTGGGCG ACCGTTATCA GATGTGGCTT TTGTTGTCCG CGAGGGAGCT
AGGCTTGCGG CACGGGCTGG CAAGGACAGA TTGGATCAGG ACAGCCTGCT CACAGCAATG
CATGCGGCAC CAGCCAGAGA GCGCGAAGGC GCTAAGCGGC ATCCGATTGG CTTCATCCGG
TAA
|
|---|
| Protein sequence | MPLDAWLPVG YKLPDGAKVR VAVSEGVNWQ ICETHGGGRA LVVQHELASR WIDAGLITEG
PIRFFDFGNQ QYGAIACGAD QVLCPIVEGN SPDTKAEALS FALALKATRD IDSDSPLQDA
LYVEKISRLL PTYSITARTD DDVVLGYWLT GGATVSAKSF RRLRQTMSWL SASHLQEVVQ
AGGFEVAEVI PADRSRSLPS RPDNKQAERT DRKEEPRDQQ HASKAFELAG RPDLAAFFNE
HIVDIIQNRD RYKALGIEFP SAIVLHGPPG CGKTFAVERL IDFLGWPSFQ IDASSVASPY
IHETSKKVAE VFDKAMENAP SVLVIDEMEA FLADRETGSG HHRVEEVAEF LRRIPEAAKN
DVLIVAMTNR VDMIDPAILR RGRFDHVVNV DFASEVEVLS LLEKLLSTLP KEDDVDPTPF
AQELAGRPLS DVAFVVREGA RLAARAGKDR LDQDSLLTAM HAAPAREREG AKRHPIGFIR
|
|---|
| |