| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0610 |
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| Symbol | |
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| ID | 3706842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 656088 |
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| End bp | 656741 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637737118 |
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| Product | TonB-like protein |
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| Protein accession | YP_342659 |
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| Protein GI | 77164134 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00121909 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGATTCT TAATTGCTAT CGCTATTGCC GGGCTGGTCA ATCTGGGATT GTTTTTGCTT
ATGTCGTTTA TGGCGGCCGG GCAGCAACGG GGTCCGGAAG GGATCGAAAC AGCAACCATG
GTGGATTTTG TGCGCTTAAA GCGCGAGTCG GCGCCCCCCG AACCTAAGGA GCGCCAACTG
CCTAAAAAGC CCCCGCCACC AGAAGAACCC CCATCCATGA TGATGCCTCG GCCTCAAGCG
CCTCAGCCTA AGCCGTCGGC TTTAGCCAAG GTAACTCCCC ATATTGAACT TCCTCTTAGT
CTTAAGAGCG ATGGCCCCTA TTTAGGGGAC TATGGACAAA CGCCGGGAAC GTCTTTAGGG
TCCGGCATCG TGCCAGCGGG CGAGGGCGAT CTGCTTCCTC TGGTAAGGAT TTCTCCTCAA
TACCCACGGC GTGCGGCTCG CCGCGGCCTG GAGGGATCAG TCACCGTTGC GTTTATTATT
ACGAAGGAGG GCTCGGTCCG GGATCCGAAG GTGATTGAAT CCCATCCCTC AGGTATTTTT
GAGCAGGCTG CCCTGCAGGC CATTAAGCGC TGGAAGTTCA AGCCTAAACA GATAGAGGGA
CAATTGGTAG AGCAACGAGC CACGCAGGAA ATTGAGTTTA ACCTGGCAAG ATGA
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| Protein sequence | MRFLIAIAIA GLVNLGLFLL MSFMAAGQQR GPEGIETATM VDFVRLKRES APPEPKERQL
PKKPPPPEEP PSMMMPRPQA PQPKPSALAK VTPHIELPLS LKSDGPYLGD YGQTPGTSLG
SGIVPAGEGD LLPLVRISPQ YPRRAARRGL EGSVTVAFII TKEGSVRDPK VIESHPSGIF
EQAALQAIKR WKFKPKQIEG QLVEQRATQE IEFNLAR
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