Gene Noc_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0413 
Symbol 
ID3706584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp455465 
End bp455866 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content42% 
IMG OID637736925 
ProductPilT protein-like 
Protein accessionYP_342469 
Protein GI77163944 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTCTTG CCGATACCGG TGTTTGGATA GATTACTTCA ACGGTGCAGT AAACGAAAAA 
ACTGATCTCC TTGATTTTGC GCTGGATGAA GGGACCATTG CCATGGGGGA TCTAATTCTT
TTGGAGATAC TCCAGGGGTT TCGCGAAGAT AGCGAATATA AAAAAGCAAA GCGCACTCTG
ACCACACTCG ACCAGTACGA GTTATTTGGT CACCATATGG TTGACAAGTG TGCCGATAAT
TATCGATTTC TGAGAAAAAA GGGAATTACC ATCAGGAAAA CTGCCGACCT TATAATTGCT
ACATTTTGCA TTGAGAACAG ATTTCAGCTG CTATTTTCTG ACAAAGACTT TGCCCCTTTC
GCGGACTATT TAAATCTGGA GCAGTTTCAA CCAAAAACAT AA
 
Protein sequence
MILADTGVWI DYFNGAVNEK TDLLDFALDE GTIAMGDLIL LEILQGFRED SEYKKAKRTL 
TTLDQYELFG HHMVDKCADN YRFLRKKGIT IRKTADLIIA TFCIENRFQL LFSDKDFAPF
ADYLNLEQFQ PKT