Gene Noc_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0404 
Symbol 
ID3706575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp448476 
End bp449093 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content47% 
IMG OID637736916 
Producthypothetical protein 
Protein accessionYP_342460 
Protein GI77163935 
COG category[S] Function unknown 
COG ID[COG3755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTGC CAGATTTTAT AAAAGATGTC GTGCTGCTCC TGCTAGGTGG AGTCGGGACT 
GCTGTGTGGT TTTTCTGGCG TCGCAGGACA GAACAAGCGC CAGTATTTGA AAACATCCAC 
AAAGCCGAAA AACTTCTCTC GCTTCGAAAA GAACTCGACA ACACCAACTA CACCTTTGAG 
GATCTAAAGA GCCTTGAAGA TGCGCTGATG GAGCGGGCAG ATGTTGCGAA AGTACTAAGC 
ATCAGCTACG AAGAAGAGGC TAAACAAGTT CGTGAAATTG AGATGAGTAC TGCGATGACA 
CAGGCAGAAA TGAATATTGT TGCCGGAAAT GCCTATCAAA GCGCCGAGCG TAAACTTGAT 
GCAATACTAG AACAAATCAA GGAGTTCTTG TCTCCTGAAG AATCTGCTCT GTTAGATGAA 
GCTAATCAAG CCTGGCGTAC CTACCAGAAA AGCCATGCTG ACTTCTCAGC CTCACAATAC 
GAGGGGGGCA GTATTCAGCC GCTCATTTAT GCCTCAACAA TGGAGACGGT CACCGTTGCA 
CGAATAGTTG AATTGGAAGC AGAGCTTAAG TTCATGAAAG ACACGCGGGT GCCAAATGCC 
GAGCAAGACG CCTTATAA
 
Protein sequence
MQLPDFIKDV VLLLLGGVGT AVWFFWRRRT EQAPVFENIH KAEKLLSLRK ELDNTNYTFE 
DLKSLEDALM ERADVAKVLS ISYEEEAKQV REIEMSTAMT QAEMNIVAGN AYQSAERKLD 
AILEQIKEFL SPEESALLDE ANQAWRTYQK SHADFSASQY EGGSIQPLIY ASTMETVTVA 
RIVELEAELK FMKDTRVPNA EQDAL