| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0387 |
|---|
| Symbol | |
|---|
| ID | 3706558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 427761 |
|---|
| End bp | 428171 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637736899 |
|---|
| Product | transposase IS200 |
|---|
| Protein accession | YP_342443 |
|---|
| Protein GI | 77163918 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1943] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCATA GCCAGATGAG TAGATACGCC AAAAATGCCG GGGCGGTTTT TAGTCTTAAA
TTGCACCTTG TGTGGTGCCC CAAATATCGC CGCGGGGTTC TTGTGGGTGA GATTGCCGAA
CGCCTTTGTG CCTTGCTCCA CAAGAAGGCG GATGAACTTG AAATGACAAT TCATGCTTTG
GAAGTTATGC CGGATCATGT CCACCTGTTC GTTGAGTTTG ATCCTCGTTG GGGTGTGGCG
GAAATGGTTA ACAGGTTCAA AGGCTCCACG AGCAAGGAAT TGCGAAAAGA ATTTCCTATC
CTCCGATCCA GGCTTCCCAC ACTTTGGAAT CGTAGTTACT ACGCCGGGAC CGTAGGCCAC
GTATCCGAAA GCACTGTTCG CGCTTACATC GAAAACCAGA AAGGCAAGTA G
|
|---|
| Protein sequence | MHHSQMSRYA KNAGAVFSLK LHLVWCPKYR RGVLVGEIAE RLCALLHKKA DELEMTIHAL
EVMPDHVHLF VEFDPRWGVA EMVNRFKGST SKELRKEFPI LRSRLPTLWN RSYYAGTVGH
VSESTVRAYI ENQKGK
|
|---|
| |