| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0294 |
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| Symbol | |
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| ID | 3706465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 321908 |
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| End bp | 325033 |
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| Gene Length | 3126 bp |
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| Protein Length | 1041 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637736809 |
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| Product | heavy metal efflux pump |
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| Protein accession | YP_342353 |
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| Protein GI | 77163828 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.393519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCACGC TCACTGAAGC CGCCATGATC GCCAAAATAA TTCAATGGTC CCTGAAGCAA
CCCTTGCTGG TTCTCCTGAG TGCCGCCGCC CTCTTAGGGT GGGGAAGCAT TGAGGCCCTG
CGAATGCCTG TAGATGTCTT CCCCGATCTG ACCACGCCCC GAGTAACGGT TGTGGTTGAG
GCCCATGGCA TGGCTCCGGA AGAGGTGGAA GTTCTCATCA CTTTCCCTCT GGAGACAGCG
TTTAATAGCG CCATGGGCGT ACGGCGGGTG CGCTCTTCAA GCGGTGTTGG CTTTGCCGTC
ATCACGGTTG AATTTGACTG GGGAATGGGT ATTTATCGAG CCCGGCAAAT TGTGGCTGAG
AAACTGCAAT TAGTGCGTGG CGCGTTGCCG CCCGATATTC CGCCGCCAGT GATGCAGCCA
GTGACTTCCA TCATGGGCGA GATTATGTTC ATTGCCTTGA CCTCCGAGAG GCACAGCGCT
ATGGAACTCA AGACCCAAGC GGACTGGGTA GTGCGCCACC GCTTGCTGGC GGTTCCAGGT
GTAGCTCAGG TCATTCCCAT CGGCGGCGAT ACCAAACAAT ACCAGGTCAT ACTCAAACCC
GAGCGCCTGG TTGCCTACGA TATTGCCATG GATGAAGTGG TGGCGGCCTT ACGGGAGACT
AACCAGAATA TCTCGGCGGG GTTTTATGTG GAAGGAGGTC AGGAGCACCT TATTCATGGG
ATAGGCCGGG TTCAGCGCCT TGAAGATATC CGCGAAACCC TTATCGGCCA GCGTGGCGGT
CAGTCCGTGT TGGTGCGCCA TGTGGCGGAA GTGGCTTTGG GCCCGGCCCC CAAACGGGGC
ACCGGCGCTC TGAATGGGGA AGCGGCGGTA ATTATTGGAA TCCAGAAGCA GCCCGGCACG
AATACGTTGG CCCTGACGGC GCGTCTGGAT CAAGTTTTGG CCGAGCTACA GGCCTCCTTG
CCGTCAGGGA TGATCTTCAA CACTCATATT TTCCGGCAGG CGGATTTTAT CACCGTTTCT
ATCAATAATT TGCTGGCGGC CCTACGGGAT GGGGCGATTC TGGTGGCCGC GATCGTCTTT
GCCTTTCTGA TGAGCACCCG GGCCAGTGTG ATTACCTTGC TTGCTGTGCC CCTTTCTTTG
GTAACCGTTA TTCTTGTGAT GAAGGCCCTG GGGACAACTT TCAACACCAT GACTTTGGGG
GGGATGACCA TTGCCCTGGG GGCTTTGGTG GATGATGCCA TTATCGTGAT GGAAAATATT
GTCCGCCGCC TGCGGGAAAA TCAGCAGCGG GATAAGGGAC AACGACGCTC CACCGGCAAA
GTGGTCTTTG AAGCTACCCG AGAAATTCAG GGTTCTATTG TCTTTGCCAC CTTGATCATT
GTCTTAGTTT TTCTACCCCT GGTTTTTCTC TCTGGGGTAG AAGGTCGTCT GATGCAGCCC
CTCGGGGTGG CCTACGTCGT TTCTCTGGCC GCCTCCTTGC TGGTGGCTAT TACCGTGACT
CCGGTACTCA GCGCCTTACT TTTGCCTCAA GCTCGGATTG TCCAGGCGAG CCGGGAGATC
TCGCTAGCGC GAAGTCTCAA AAGGCACTAT GAGCGGCTCC TTGCAGCGAC TATTACCCAG
TGGAAAGTTA TTACCTTGAT TGCAATGACT GCTTTGGCTG CTGCGCTGAT AACTCTTGCT
GGAGTGGGGC AGGTGCTTTT GCCGAGCTTT AATGAAGGTA GCCTCACAAT CAACACGATG
ACATTGCCAG GGACTTCCTT GGAACAATCT GATCGGCTGG GGCAAAGAGT GGAGAAAATC
CTGCTGAGCT ATCCGGAGGT GGTGTCTACG GCCCGGCGGA CCGGCCGGGC CGAGCTCGAC
CCCAACGCCC AGGCCATCTA TGCTTCCGAG ATCGATGTGA ATTTGAGGCA GGGAGAGCGG
AGCAAGGAAG CTTTTTTGGC GGCCTTGCGA GCGGATTTAG CCCGCCTTCC TGGGATGCAA
ATCAACATTG GCCAGCCCAT TTCACACCGC ATCGATCACA TGCTTTCGGG GACCCGCGCC
AATATTGCGG TCAAGATCTT CGGGCCTGAC CTCTATGAAT TACGCCGGCT AGGACAACAG
GTTAAGGCCG TGATGGCAGG AGTGCCCGGT GTGGTGGACC TAGCGGTACA GCAACAGACG
GATATTCCCT TTCTGACAAT TAGGTTTAAA CGCCAGGCCA TTGCTCGCCA TGGCCTGCGG
GTGCAAGAGG TGGCCGAGGC GGTGAAAGGG GCTTTTTATG GGCAGCCCGT TTCCAAAATC
CTGGAAGGAC GGGCCAACTT TGACTTGGTC GTGCGCTATG ATCCGAGAGT CAAAGCTGAT
CTAGAAGCAG TCCGTGCCAC CTTGATGACC ACCGGAAGCG GCGCTCATTT GCCTCTCCAT
GCACTAGCAG AGATCCGCAA AGATCGGAGT CCTAATTTCA TCAGCCGGGA AGATGTTCAG
CGTAAGATGG TGGTCATGGC CAATGTGGCG GGCCGGGATC TCGTCAGTGC CGTCGAGGAG
ATACAACAGG GTGTCCGTCA GAGTTTGTCA CTGCCTGCAG GTTACCATGT TGAATATGGT
GGTCAATTCA AGAGCGCCAA AGCAGCTTTC CGCACTTTAT CAATCGTCAG CGTCCTAGTT
ATTCTGGGCA TCTTTCTATT GTTATTTATG GCGTTCAATT CAGCACGAGA TGCTTTCCTG
GTGATGCTAA ATCTGCCCCT TGCCCTGATA GGTGGGGTCG TGGGTGTTTA CTTCTCCGGG
GGAATACTTT CGGTGGCTTC GATCATTGGC TTTATTACCC TGTTTGGGAT TGCGACCCGT
AATGGAGTCA TGATGATTGC CCATATCCAT CACTTGGTAG AGCGGGAGAG GGTGCGGGAT
CCCATGACGG CGGTGATCCG GGGGGCCAAG GAGCGTCTTA TTCCCATTCT TATGACAGCC
TTAGCCACGG CGCTTGCCCT CATTCCCTTG GCGTTGGGCG CGGGAGAGCC GGGGAGTGAG
ATCCAAGCCC CTATGGCCAT GGTGATCCTC TTCGGTCTTT TGACTTCAAC GGCGCTTAAT
ATGATGGTAG TCCCGGCTCT CTATCTGCGT TTTGGCGTGG CGAGTCAAAA GTTGAGGCAT
CCATGA
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| Protein sequence | MVTLTEAAMI AKIIQWSLKQ PLLVLLSAAA LLGWGSIEAL RMPVDVFPDL TTPRVTVVVE
AHGMAPEEVE VLITFPLETA FNSAMGVRRV RSSSGVGFAV ITVEFDWGMG IYRARQIVAE
KLQLVRGALP PDIPPPVMQP VTSIMGEIMF IALTSERHSA MELKTQADWV VRHRLLAVPG
VAQVIPIGGD TKQYQVILKP ERLVAYDIAM DEVVAALRET NQNISAGFYV EGGQEHLIHG
IGRVQRLEDI RETLIGQRGG QSVLVRHVAE VALGPAPKRG TGALNGEAAV IIGIQKQPGT
NTLALTARLD QVLAELQASL PSGMIFNTHI FRQADFITVS INNLLAALRD GAILVAAIVF
AFLMSTRASV ITLLAVPLSL VTVILVMKAL GTTFNTMTLG GMTIALGALV DDAIIVMENI
VRRLRENQQR DKGQRRSTGK VVFEATREIQ GSIVFATLII VLVFLPLVFL SGVEGRLMQP
LGVAYVVSLA ASLLVAITVT PVLSALLLPQ ARIVQASREI SLARSLKRHY ERLLAATITQ
WKVITLIAMT ALAAALITLA GVGQVLLPSF NEGSLTINTM TLPGTSLEQS DRLGQRVEKI
LLSYPEVVST ARRTGRAELD PNAQAIYASE IDVNLRQGER SKEAFLAALR ADLARLPGMQ
INIGQPISHR IDHMLSGTRA NIAVKIFGPD LYELRRLGQQ VKAVMAGVPG VVDLAVQQQT
DIPFLTIRFK RQAIARHGLR VQEVAEAVKG AFYGQPVSKI LEGRANFDLV VRYDPRVKAD
LEAVRATLMT TGSGAHLPLH ALAEIRKDRS PNFISREDVQ RKMVVMANVA GRDLVSAVEE
IQQGVRQSLS LPAGYHVEYG GQFKSAKAAF RTLSIVSVLV ILGIFLLLFM AFNSARDAFL
VMLNLPLALI GGVVGVYFSG GILSVASIIG FITLFGIATR NGVMMIAHIH HLVERERVRD
PMTAVIRGAK ERLIPILMTA LATALALIPL ALGAGEPGSE IQAPMAMVIL FGLLTSTALN
MMVVPALYLR FGVASQKLRH P
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