Gene Noc_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0288 
Symbol 
ID3706459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp315513 
End bp315944 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content48% 
IMG OID637736803 
ProductDNA polymerase III chi subunit, HolC 
Protein accessionYP_342347 
Protein GI77163822 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.696514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAGG TTGATTTCTA CTTGTTGACC AGCCGCCAGC CGCAAGCTAG CAAGCGGTTT 
ACCTGTAAGT TAATCGAGAA AGTCTACCGG CTTGGCCACC AAGTTTATAT TCAAGTGGAA
GATCAAGCCC AGGCCCAGGA AATGGATGAT CTCTTATGGA CCTTCCGCCA GGGTAGTTTC
GTACCCCATG CCCTGGTTAA TAGCGAGGAG GCCACCGGCA CTCCCGTGCT TATTGGTTAT
GATGGGGAAC CGGGAGGAAA GCTGGAACTC TTAATTAATC TTGGCGCGGA AGTGCCAGCT
TTTTTTTCCC GTTTCCAAAG AGTAGCGGAA GTTATCGGCC CGGATGAAAC TCATCGCCAT
GCTGGCCGTC AACGTTATCG TTATTATCGG GATCATGGCT GCTCACTAGA AACACATGAA
TTAAATTTTT AA
 
Protein sequence
MTKVDFYLLT SRQPQASKRF TCKLIEKVYR LGHQVYIQVE DQAQAQEMDD LLWTFRQGSF 
VPHALVNSEE ATGTPVLIGY DGEPGGKLEL LINLGAEVPA FFSRFQRVAE VIGPDETHRH
AGRQRYRYYR DHGCSLETHE LNF