| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0057 |
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| Symbol | |
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| ID | 3705933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 57899 |
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| End bp | 59566 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637736582 |
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| Product | hypothetical protein |
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| Protein accession | YP_342129 |
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| Protein GI | 77163604 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACGA ATAAACACGA AATAGAGGCA TTGATCCAGC GAGGCGAGAG TGTTTCTCTA
GAGTTCAAAA GTGACCTGAA GCGCCTGCCG GATCGGGAGC TTGTGGCGGC TGTGGTTTCT
TTAGCAAATA CGGACGGCGG CGATCTATTG CTCGGCGTGG AGGATGACGG CACGGTTACC
GGTTTGCATG CAAGTCACCT GAATGTTTTA GGTATCCCGC CTCTCATTGC AAATAAGACG
AATCCTGCTA TTTCGGTTCG CGTGGAAAAG TGCGAGTCAA CGGGAAAGTC CATTGCCCGG
ATCAGGGTGC CGAAGTCCCA GCAACTGGTA TCCACTTCCG ACGGCTTTTT GGTACGCCGA
CGCCTGAAGT TCGATGGAAC ACCGGAAGCA GTACCTTTCT ATCCCCACGA ATTTATTCAA
CGCCAGTCGT CCCTGGGCCT CGTCGATCCC TCAGCCATGG TACTTGAGGA AGTAGACTCG
GGTCAGCTCG ATCCGCTTCA GCGCCTGCGT ATCCGTAGTG CCATAAAAAA GTATGGTGGG
GAGCAATCCC TGCTTGCTCT AGCTGATGAC GAACTGGACG GCGCACTTGG GCTTTGTCGT
GAATCGAATG GCGCTAGACA CCCCACCATG ACCGGGTTAC TGGTATTGGG AACGGAAGAA
CTCCTGCGAG CCCATGTGCC CGCCTATGAG GTCGCCTTTC AGGTGCTTCA GAGAACCGAT
GTCAAGGTCA ACGAGTTCTT TCGGAAACCG CTTCTGGAAA CCTTTGAAGA AGTGGACCCC
CTCTTCAAGG TCCGGGTTGA GGAAGAAGAA ATTCAGGTTG GCCTTTTCCG GGTACCTGTA
CCCAATTATG ATCGCCGCGC CTTTCGTGAG GCTTTTGTGA ATGCGCTGGT TCACCGTGAT
TTCAGCAGGC TCGGTGCGGT GCATGTCAAA ATCACTGATG ATGGTCTCAC TATCAGCAAC
CCGGGTGGTT TCGTCGAGGG GGTGAGACTG GATAACCTGC TCGTAGTCGA TCCTCGTTCC
CGTAATCCCC TCCTCGCCGA TGTGATTAAG CGGATCGGCC TGGCCGAGCG CACCGGGCGT
GGCATCGACC GCATTTACGA GGGCATGCTC CGCTACGGAC GCCCCGCGCC TGATTACTCA
ATGTCCGATG AATTCACGGT TTCAGTACAG ATGGTGAATG CTGCTGCCGA TCTCGATTTC
CTCAAGATGG TGGTCGAGCA GGAGGATAAG CTTGGCAACA TGCCGATTGA CTCCCTGATC
ATACTCTCCC GCCTTCGGGA AGAGCGACGA CTAACCACTG CGGACCTGGC CCCATCCGTC
CAGAAATCAG AAACCAACGT GAGGATAACC CTGGAGAAGC TGGTTGAAAC CGGATTTCTG
GAGCCGCATG GCACCGGCAG GGGGCGGACC TATACCCTCA GCGCTGCCCT GTACCGTAAG
GCAGGAAAGA AATCGGAATA CATCCGCCAG GCCGGTTTTG CGCCCATCCA GCAAGAGCAA
ATGGTGCTGA AATACATTGA TGCGCACGGT TCCATCAAAC GAGCAGATGC CGCTGATTTA
TGCCGGATCA GCCCATTTCA AGCCACGCGT TTGCTTAAAC GGATGGAAAA GAATGACTTA
GTAAAGCCTG TTGGGCAGGG AAGAGGGACG CGTTATGAGC GAAAATAG
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| Protein sequence | MNTNKHEIEA LIQRGESVSL EFKSDLKRLP DRELVAAVVS LANTDGGDLL LGVEDDGTVT
GLHASHLNVL GIPPLIANKT NPAISVRVEK CESTGKSIAR IRVPKSQQLV STSDGFLVRR
RLKFDGTPEA VPFYPHEFIQ RQSSLGLVDP SAMVLEEVDS GQLDPLQRLR IRSAIKKYGG
EQSLLALADD ELDGALGLCR ESNGARHPTM TGLLVLGTEE LLRAHVPAYE VAFQVLQRTD
VKVNEFFRKP LLETFEEVDP LFKVRVEEEE IQVGLFRVPV PNYDRRAFRE AFVNALVHRD
FSRLGAVHVK ITDDGLTISN PGGFVEGVRL DNLLVVDPRS RNPLLADVIK RIGLAERTGR
GIDRIYEGML RYGRPAPDYS MSDEFTVSVQ MVNAAADLDF LKMVVEQEDK LGNMPIDSLI
ILSRLREERR LTTADLAPSV QKSETNVRIT LEKLVETGFL EPHGTGRGRT YTLSAALYRK
AGKKSEYIRQ AGFAPIQQEQ MVLKYIDAHG SIKRADAADL CRISPFQATR LLKRMEKNDL
VKPVGQGRGT RYERK
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