| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0053 |
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| Symbol | |
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| ID | 3705929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 50043 |
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| End bp | 51848 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637736578 |
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| Product | TOPRIM domain-containing protein |
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| Protein accession | YP_342125 |
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| Protein GI | 77163600 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00140147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAAAA CATTTTCCGA TTTTGGGATT GATGTGCCGC CCGCCGCTTC CGGGCAACTC
AGTCTCACCT GCCCCCAGTG CTCCGCTCAA CGCAAGAAAA AACGTGCCAA GTGCTTAAGC
GTCAATGTCG AGAAAGGGGC GTGGATATGC CACCATTGTA GCTGGCGAGG GGGGCTTTCC
CAGCGGGAGC AGTCCAATCG CACTCTGTAC TGGCGACGCC CCGATTACCG ACAGCCGGCG
CCCTTTTCCC CGGGAGCCCT GCCTGAAGAT ATCCAGCGCT GGTTTGCCAA ACGGGGGATT
ACCCCCGCGG TCCTTGAGCG CAATCATATC GCGACCAAAA AGGTGTATAT GCCCCAGCTG
GAGAGGTGGG TGAGCGCGAT CGCCTTTCCT TACTACCGGG GCGAGACGCT CATCAACGCC
AAGTACCGGG ATGGGAGGAA ACACTTCCGC CTGGAGGCCG GGGCCGAGCG CATTTTGTAT
GGACTTAACG ACTTGGAGCA GACTACCCTC ATTGTGGAAG GGGAGATGGA TAAACTGGCG
TTAGAGGTAG CCGGTTTTCG CAATGTGGTC AGCGTCCCCG ATGGCGCCCC CCCACCCCAG
GCTAAGGATT ATGCCCGCAA ATTTGAGTTT CTGCAGGCGG ATGAAGAAGC GCTTAAGACG
GTCAAGACGT GGGTAATCGC AGTCGACAAT GACGCACCCG GGCAGTATTT GGCCGAGGAA
CTCTCCCGTC GCTTCGGGCG AGAAAAATGT AAGCGGGTCC TCTGGCCTGA AGCGTGCAAG
GATGCCAATG AGGTGTTGCT GAAGCGGGGA CCTGAGGTGC TCACCGATTG CATCAAAAAT
GCCCAGCCTT ATCCTCTCGC CGGGGTGTTG ACGGTCAGCC ACCTCAGCGA AGACATCGAT
TTTCTCTATA CCCATGGGCT CAAGCGGGGG ATGTCAACCG GCTGGCCCTC TGTGGATATA
TGTTACACCG TCAAGCCTGG GGAGTTGACG GTGGTGACGG GTGTCCCCAA CAGTGGGAAA
TCCAATTGGC TGGACTGCTT AGCCCTGAAT CTTGCCCAGC AGGGCTGGCG CTTTGGTGTC
TTCAGCCCCG AGAACCAGCC AGTGGGCCAC CATATGGCGC GGATGATAGA AAAGTGGGCC
GGTAAGCCGT TCAATAAAGG GTCTATTGCC CGACTGAGCC GGTCCACGCT GGCGCAGGGA
AAGGACTGGG TGCATGAGCA CTTTTATTGG ATTCTCCCAG AGGATGACCA GGATTGGACC
GTCGAGCACG TTCTGGACCG TGCCAGGGCG CTGGTGCTGC GGTATGGGAT TAAGGGGCTC
CTGCTCGACC CCTGGAATGA GTTTGAGCAT CTGCGTGCGC CCAATGTCAC GGAGACGGAG
TATATCTCGT TGGTTTTAAA GCGGGTGCGG CAATTCGCCC GTTATTACCA GGTCCATGTG
TGGATAGTGG CCCATCCGGC AAAGCTCTTC CGGGGCAAGA ACGATCAATA TCCCGTGCCC
ACGCTCTATG ACATCTCAGG CTCGGCTAAC TGGCGCAATA AGGCCGATAA TGGCCTCGTG
ATTTGGCGCG ATCTTGGCGA CCCTAAAAAA GATTTGGTGG AGATTCATAT CCAAAAGATT
CGCTTTCGGG AGGTGGGAAG ATTGGGCGCA GTGCGGCTGC GTTTTGACCC TGTGACGGCA
GTGTACCGGG AGCCTGAACC CGATGATGAA GCGGCCTTCC CCCCTGCGGA TGGAGCTGAT
AAGGCGGATG AGCAAGCGTA TCTGGACAGT CTGTACGCCG AGTATGAGGC CCAGGGCGGA
AAATAG
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| Protein sequence | MDKTFSDFGI DVPPAASGQL SLTCPQCSAQ RKKKRAKCLS VNVEKGAWIC HHCSWRGGLS
QREQSNRTLY WRRPDYRQPA PFSPGALPED IQRWFAKRGI TPAVLERNHI ATKKVYMPQL
ERWVSAIAFP YYRGETLINA KYRDGRKHFR LEAGAERILY GLNDLEQTTL IVEGEMDKLA
LEVAGFRNVV SVPDGAPPPQ AKDYARKFEF LQADEEALKT VKTWVIAVDN DAPGQYLAEE
LSRRFGREKC KRVLWPEACK DANEVLLKRG PEVLTDCIKN AQPYPLAGVL TVSHLSEDID
FLYTHGLKRG MSTGWPSVDI CYTVKPGELT VVTGVPNSGK SNWLDCLALN LAQQGWRFGV
FSPENQPVGH HMARMIEKWA GKPFNKGSIA RLSRSTLAQG KDWVHEHFYW ILPEDDQDWT
VEHVLDRARA LVLRYGIKGL LLDPWNEFEH LRAPNVTETE YISLVLKRVR QFARYYQVHV
WIVAHPAKLF RGKNDQYPVP TLYDISGSAN WRNKADNGLV IWRDLGDPKK DLVEIHIQKI
RFREVGRLGA VRLRFDPVTA VYREPEPDDE AAFPPADGAD KADEQAYLDS LYAEYEAQGG
K
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