| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_A0008 |
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| Symbol | |
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| ID | 3704296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007483 |
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| Strand | - |
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| Start bp | 5468 |
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| End bp | 6664 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637736503 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_342051 |
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| Protein GI | 77163525 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3568] Metal-dependent hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.203843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGC GGTTATTAAT CTTATTTTTT CTTTTTCTAC CCACTATCTC AGCGCAAGCG
TTCACCATTG CAAGCTGGAA TACCAAACAT TTAGGGTGGG GAGACAAGAG GAACTGGAAC
GCAACCGCGG CGGTCGTAGC ACCCTACGAT TTTGTCGCCC TCCAGGAGGT AATGAGTAAA
ACGGCCGTCA ACCATCTGGT CCAGACGCTG AAGAAGCAGA CCGGAGTAAA ATGGTCCTCA
CTGGTTTCGG GAACCAGCGT AGGACGCTCG AAACGTTACC AGGAATTCTA TGCTTTCATC
TGGCGTGAAG AGGCTGTCGA TTATGTGGGC GGCGCTGTGG TCTATTTAGA CCCAGGCGAT
ATCTTTGCGC GGGAGCCTTT TGCAGCACGG TTTCAGACAG ATAATGGAAA GTATCGTTGG
ACTGCGGCCA CCGTACATGT GGTCTATGGA GATAGCCGGG ATGAGCGGCG CCGAGAAGCA
CAGCAGCTTG ATGAGTATGT AAACTGGCTA GAGGAAAACG TCGCTGAAGG AGATCCGGTG
GTTCTGATGG GCGACTTCAA CCTACCCCCG GATTCAGCGG GATTCCGGGA TCTGGCTAAA
GTACTTAAAC CCGCTATCCG GGAAGGGGCA ACGACTCTGT CCGCCAAAGA GGGCCGGTAC
GCCAATCTCT ACGATAATAT CTGGTACCGA CCGGATGCCT TGAAAATCCA GGAAGCCCGG
ATCGATCGTT TCCCTCAGCG TTTGGGAATT ACTCACAAGC TAGCTCGAAA AACCGTCAGT
GACCATGCTC CCGTGGTGAT TGTGCTTGGT GATCCGGTAT CCCCATCTCC AAAAGGAAAA
TTGAATGGCG CACAGACAAC CTCTTCAGCC GAGCGAAAGG CAACATTAGC AATTATTTGC
GTGCATCCCG ATGCGCCTGG AAACGATAAC AAAAATCTGG CCGGTGAATG GGTGGAGATA
CAGAATTCTG GCGCTCAGCA TCTGGATTTA ACCGGCTGGA TACTGGCGGA TGAAGCGGAC
CATAAGATTG CCTTACAAGG CAGCCTTAAT GCTGGCGGTA CCCTTCGGAT AGACTCCACC
GCAATAGGAC GCCCTATATG GAATAATTCG GGGGATACGG CGATTTTGCG TGATCCAGAG
GGGACTGTGG TCTCAACGCT GCGCTACCCC GGCGGGAGAA TTTGCGAAGA TCGCTAA
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| Protein sequence | MGKRLLILFF LFLPTISAQA FTIASWNTKH LGWGDKRNWN ATAAVVAPYD FVALQEVMSK
TAVNHLVQTL KKQTGVKWSS LVSGTSVGRS KRYQEFYAFI WREEAVDYVG GAVVYLDPGD
IFAREPFAAR FQTDNGKYRW TAATVHVVYG DSRDERRREA QQLDEYVNWL EENVAEGDPV
VLMGDFNLPP DSAGFRDLAK VLKPAIREGA TTLSAKEGRY ANLYDNIWYR PDALKIQEAR
IDRFPQRLGI THKLARKTVS DHAPVVIVLG DPVSPSPKGK LNGAQTTSSA ERKATLAIIC
VHPDAPGNDN KNLAGEWVEI QNSGAQHLDL TGWILADEAD HKIALQGSLN AGGTLRIDST
AIGRPIWNNS GDTAILRDPE GTVVSTLRYP GGRICEDR
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