| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A2176 |
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| Symbol | |
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| ID | 3692420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 2658699 |
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| End bp | 2660381 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 637732430 |
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| Product | nodulation efficiency protein D |
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| Protein accession | YP_337327 |
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| Protein GI | 76818292 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCGCGGG ATGAGCCCCG CCGACTACCG CGACGCCGCG CTCGCCGCGC GCGCGGCCGC
TTCGCGCTTT CGCCGGAAAC CGCCTACTCT TTAAGCACCG GGCGCACGCC CTTTCCACGG
CCCGGCTGCG GCGCCGCACC ATGCGGCCGC GCGCCGCCGG CCGACACCGC GATGCCCATG
CCCCGTTCCT CGCCGCGGCC GCCGCCCGCG CGCGGCAAAC TCCCCGCGCG GCTCGCGCGC
GCGGCCGTGC TGATCGGCCT GCTGCTCGCA TGCGCGGCGG TGGCCGGCGC CGCCGCCGCC
GCGCGCGCGC CCATCGTCGT GATCCCGGTC GCGGGCGCGA TCGGCCCGGC GAGCGCCGAT
TTCGTCGTCC GCGGCCTCGA GCGCGCCGCG CGCGAGCACG CGCCGCTCGC GATCGTCCAG
CTCGACACGC CCGGCGGCCT CGACACCTCG ATGCGGCAGA TCATCAAGGC GATCGTCGCC
TCGGGCGTGC CCGTCGCCGC GTTCGTCGCG CCGGGCGGCG CACGCGCGGC GAGCGCCGGC
ACCTATATCG TCTATGCAAG CCACGTGGCG GCGATGGCGC CCGGCACGAA CCTCGGCGCG
GCGTCGCCCG TGCAGCTCGG CATCGGCGGC CAGGCGCCGG CGGGCGGGCG ACGCGAGCCT
GCCGGCGCGC CCGGGGCGGC GGGCGCGGGT GCGACCGATA CGGAATCGAT CGAAACCCGC
AAGGCGCTGC ACGACGCGGC CGCTTACATC CGCGGCCTCG CGCAGTTGCG CGGGCGCAAC
GCCGAATGGG CGGAGCGCGC GGTGCGCGAG GCGGTGAGCC TGCCCGCGAA CGACGCGCTC
GCACAGCACG TGGTCGACCT GCTCGCGAAC GACCCGGCCG ATCTCGCCGC GAAGCTCGAC
GGCCGCACGA TCGTCACCGC CACGGGCGCG CACCGGCTCG ACACCGCGCA GGCGCCGCTC
GAGACGCTCG AGCCCGACTG GCGCAGCCGG CTGCTCGCGA CGATCGCCGA TCCGAGCGTC
GCGCTCGTGC TCGTCACGCT CGGCATGTAC GGGCTCTTCT TCGAATTCGC GAATCCCGGC
TTCGTGCTGC CGGGCGTCGC GGGCGCGATC AGCCTGCTCG TCGGCCTGTT CGCGCTGCAA
TTGCTGCCGA TCAGCTACGC GGGCCTCGCG CTCGTGCTGC TCGGCATCGC GTTCCTGATC
GCCGAGACGT TCCTGCCGAC GTTCGGCGCG CTCGGCGTGG GCGGCATCGT CGCGTTCGCG
ATCGGCGCGC TGATGCTGAT CGACACCGAC GTGCCCGGCT ACGGCGTGCC GTGGCCCGTG
ATCGCGTCGC TCGCGGCCGC GGGCGCGATC CTCGTGTTCG GCGTGTCGGG CTTCGCGCTG
CGCGCGCGCC GGCGGCCCGT CGTCACGGGC GCGGAGGCGA TCGTCGGCAG CATCGGCGAG
GTGCTCGACG ACGGGCTCGT GCCCGATCAG CCGCCGCAGA TCGGCCCGAG CGCGGACCCG
GGCGCGCCGC TCGCGCCGTC CGCGGCCGGC TGGGCGCGCG TGCACGGCGA GCGCTGGCGC
GTCGCGAGCG CGACGCCGAT CGCGGCCGGC CGCCGCGTGC GCGTGACGGG CCGCAACGGC
CTCACGCTCA CCGTCGCACC GCTGTACGAC AACGTCGTCC CCCCACGAGG AGAGCCACCA
TGA
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| Protein sequence | MARDEPRRLP RRRARRARGR FALSPETAYS LSTGRTPFPR PGCGAAPCGR APPADTAMPM
PRSSPRPPPA RGKLPARLAR AAVLIGLLLA CAAVAGAAAA ARAPIVVIPV AGAIGPASAD
FVVRGLERAA REHAPLAIVQ LDTPGGLDTS MRQIIKAIVA SGVPVAAFVA PGGARAASAG
TYIVYASHVA AMAPGTNLGA ASPVQLGIGG QAPAGGRREP AGAPGAAGAG ATDTESIETR
KALHDAAAYI RGLAQLRGRN AEWAERAVRE AVSLPANDAL AQHVVDLLAN DPADLAAKLD
GRTIVTATGA HRLDTAQAPL ETLEPDWRSR LLATIADPSV ALVLVTLGMY GLFFEFANPG
FVLPGVAGAI SLLVGLFALQ LLPISYAGLA LVLLGIAFLI AETFLPTFGA LGVGGIVAFA
IGALMLIDTD VPGYGVPWPV IASLAAAGAI LVFGVSGFAL RARRRPVVTG AEAIVGSIGE
VLDDGLVPDQ PPQIGPSADP GAPLAPSAAG WARVHGERWR VASATPIAAG RRVRVTGRNG
LTLTVAPLYD NVVPPRGEPP
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