| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1631 |
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| Symbol | |
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| ID | 3694023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | - |
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| Start bp | 1991543 |
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| End bp | 1994110 |
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| Gene Length | 2568 bp |
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| Protein Length | 855 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637731885 |
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| Product | putative fimbrial usher protein |
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| Protein accession | YP_336788 |
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| Protein GI | 76817744 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.121558 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCTA TTGACCAGGC TTCGTTTTGC CGCCGGGCAC GCGGCTCATG TGCCGATGCA
GGCTCACGCC GCCTCCCTCC GACGCACATC GCCGGTTGCG CCTTCCGCCC ATGGAAAGCT
CGCGACTCAA CGCGGCCCGC TTCCCTCGCC AACTCAACCA GCGCCGCTGC CGGGAGATAC
ATTGTGTACG CAAGACGGTT GGTCCTGTCG TTTAGCTTGC TCCTCGGCAT CGCATGGGGA
AGCAACGACG CACTCGCCGT CTCGTCGCCT TCGCCCAGCG CGGCGGTTGA ATTCGACACC
CAAACGCTGA TTGCGCGAGG CTATTCCGCC GACATTGCAA AATTCTTCAG CGGCGATTCG
CGCTTTCTCC CCGGCAAGCA GGAGGTCACG ATCGCACTCA ACGCCAACCA GACCTACACG
ACGAACGTTC AATTTGATGA CGACGGCGAT CCGTGCTTCG ACGCCGCGCT GTTGGACACG
CTGCGACTGC GCAAACCATC CGATCTGGCC GGCTGCGCCG ATCCCGAACA AATGTGGCCG
GAATTTCACA TGAAACTCCA CCCTGGGCAG TTTCGAATCG ACATGACCGT GCCGGAGGAA
GCATTCGACC CACGGCGACG CGGCAACGGA CTGCACTCCG GCGGCGAGGC GGTGTTACTG
AATTACGATG TCTTCGCGCA GCGCTTCGAT ACCCGGTTCG GCAGCAGCCA TTACTTACAG
GCACGGCTCG AGCCCGGCTT CAATATCGGA AACTGGTTTT TCCGTAACCG TGGAGCGCTG
ACCCATTCAG GCAAGGGATT CTCGTATCAG TTGCAAGACA CCTACCTCGC GCGTACCGTC
GACGCGTGGG GGGCCATCAC GCAGATCGGC CAGTTCACGT CCACAGGCGA AAATCTGGGC
GGCCTGCCGA TGCTCGGCTT CCAGATCAGT TCGGACCGCT TGCAAAATAG CGGGCAACTG
ACCGTTCCCA TCCAAGGCAT CGCGGAAAGC AACGCGACGG TCGAAGTGCG TCAGCGCGGC
CGTGTCGTCT ATCGCACGAT CGTCCCGCCC GGGCCTTTCA TGCTGTCCGA CATCGGCAGC
GTCGCGCAGA ACGCCGACCT CCAAATCGAA ATCACCGAAC AGGACGGACG AAAGCGACGC
TTCGAGATGC CCGTCGGCAT GGGCTATGCC GACGCGAAGC AGCCGACGAC TTGGCAGGCC
GCCATCGGCC GCTATCAGGA TGCAGGCAAT TCCGATCGAA CGCGTGCACC CGCGATATTC
GCCACCGGTG AAATCTCTTT CTCACCGCTC GACAATCTAC GCGTGTCGAC CGCCGCGCTC
GCGGCCTCCG GCTATCTTCA TGCGAGCGTC CAAGGAACGC TTTCGGCGAA ATCCGGAGCA
TGGCTTGCAA GCGGAGTGCG CTATTCGCGG ATGGCTGGCG CGGGCCAAGG ATATCAGTTC
GAGTTACAAG GCTCGTCCCG AATCGGAGGA AACGTGTTCG CATCCGCCTC ATGGCTGTCG
CGCTCGATTC GCTATACCAC GCCAGATGTC GCGCTCGGAT CGCTTGGCGA TGCAACCGGA
ACCGGTCAAA CCAAGCATTC GGCGAACGCG TCGATCAACT GGGCCCATCC GCGTTGGGGT
AGCTTTACGT ATGGCCTGTC GTACAACAGT TTCGTCGGCG CACCGAACTC CGTATCTCAC
ACGCTGAGCA TCGGTCGCAA GATCGGTCGG GCAAACGTCA GCCTTGCCGC ACAAATCAGC
CCCAAGAGCG GCAGCAGCGT CTACGCCAAC GTGTCGATTC CGCTAGGCGG TGGTTCGTTG
AGTGCGCGAA CCACGCGCTC GCAGCGGGGG GATCTCACGT TCGGCACGTC CTACGGCAAT
CGATTGGGAC GAGACGGATC GTATTCCATC GGCGCATCGG GCAGCAAGAG CGGCCAGACC
GCGAACGCGT CCGTCAGCAT GAGGACGGGC TTCGCTCAAT TTGGCGCCGG CGTGGCTCAG
AGTACGTCCA ACTCACGGTC TACCTACCTG TCTGCAAGCG GAGGCATCGC CTACGCCAAT
GGACTATTCG GCACGGCATC CAGCCGGATC GGGGAAACGT TCGCCATCGT GTCGGTCCCG
AACCAAAAGG GTTTGCGCAT CAGCGCACCT GGTGGAACGT CCATCACCAA CCCATTCGGC
ACCGCAGTCA TCTCTTCCCT GACGCCCTAC ACGAAAGCGC AACTCAGACT CGATACGCAA
AGCCTTCCCA TGAATGTGCG TCTCGACACG ACCACCGTCG ACATCGGGCT CCGACGGGGC
AGCGTGCTGA CGCGCACGAT CCATGCAGCC GAAACGCGAC AGCTCATGTT GACGATACGA
GATTCGACCG GTGCCACCGC ACCGGTCGGC ACCACCGTGC TTGATGAGCA AGGCCAGTTC
CTCGGCACGA TCATCGGAGA TGGGAACTTC ATCCTGAATG ACGACGACAT CGGTAGGCCG
ATCAGGTTGT CAGGCGTCAA TCGTAGCGAG TGCCGCGTGA CCTACGAGGC ACCCGCACGG
TTCGATCCAA ATCAGCCTTA TGAAGAGGCA GAAGGAACAT GCGGGTGA
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| Protein sequence | MPAIDQASFC RRARGSCADA GSRRLPPTHI AGCAFRPWKA RDSTRPASLA NSTSAAAGRY
IVYARRLVLS FSLLLGIAWG SNDALAVSSP SPSAAVEFDT QTLIARGYSA DIAKFFSGDS
RFLPGKQEVT IALNANQTYT TNVQFDDDGD PCFDAALLDT LRLRKPSDLA GCADPEQMWP
EFHMKLHPGQ FRIDMTVPEE AFDPRRRGNG LHSGGEAVLL NYDVFAQRFD TRFGSSHYLQ
ARLEPGFNIG NWFFRNRGAL THSGKGFSYQ LQDTYLARTV DAWGAITQIG QFTSTGENLG
GLPMLGFQIS SDRLQNSGQL TVPIQGIAES NATVEVRQRG RVVYRTIVPP GPFMLSDIGS
VAQNADLQIE ITEQDGRKRR FEMPVGMGYA DAKQPTTWQA AIGRYQDAGN SDRTRAPAIF
ATGEISFSPL DNLRVSTAAL AASGYLHASV QGTLSAKSGA WLASGVRYSR MAGAGQGYQF
ELQGSSRIGG NVFASASWLS RSIRYTTPDV ALGSLGDATG TGQTKHSANA SINWAHPRWG
SFTYGLSYNS FVGAPNSVSH TLSIGRKIGR ANVSLAAQIS PKSGSSVYAN VSIPLGGGSL
SARTTRSQRG DLTFGTSYGN RLGRDGSYSI GASGSKSGQT ANASVSMRTG FAQFGAGVAQ
STSNSRSTYL SASGGIAYAN GLFGTASSRI GETFAIVSVP NQKGLRISAP GGTSITNPFG
TAVISSLTPY TKAQLRLDTQ SLPMNVRLDT TTVDIGLRRG SVLTRTIHAA ETRQLMLTIR
DSTGATAPVG TTVLDEQGQF LGTIIGDGNF ILNDDDIGRP IRLSGVNRSE CRVTYEAPAR
FDPNQPYEEA EGTCG
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