| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1580 |
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| Symbol | |
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| ID | 3694083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007435 |
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| Strand | + |
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| Start bp | 1924416 |
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| End bp | 1925270 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637731834 |
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| Product | spermidine/putrescine ABC transporter, permease protein |
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| Protein accession | YP_336737 |
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| Protein GI | 76817648 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.333619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTCGC GTGAACTGCG CCACTTTCCG CTTACGGCAG AAGTCGCGAT TGCCGTCCTG
TTGTTTCTCT ATCTGCCGTT GGCGGTTGTC GCGTGGATGA GTTTCAATCG AGGCCCATCG
GCGCTTGTTT GGGAGGGTTG GAGCGTCCAG GGATACGTCG AGGCTTGGTC TGATCCGACG
CTTATCCGTG CGACGCAAAA CTCCCTGATC CTGGCGTTGT CATCGATGGT TCTTTCGACC
GCCCTTGCAA CGAGTGCGGC CGTCGCTGCG TGGTCACGGC AGGAAACTCG CCGCTCCGAT
CTGCGCGGAG TTGTAATTGC TTTGCCGCTC GTGATACCGG AGGTTGTTCT CGCGATCGCT
ACGGTGATGA TGTTTTCGAT ATTCGCGTTC GAAATCGGGT TCGTTGCAGT CCTGTTTGCG
CACGTGGTGT TTTGTGTCCC ACTCGCGTAT CTCCCGATCA ACGCACGTCT TAAGACAATC
GATCGGACAT TACTTGAGGC GGCGGCCGAC TTGTCGGCTC CGCCATGGGC GGCATTTCGT
CAAATCACGG TTCCTTTGGC ATTGCCCGGT ATCGTCGCCG GTGCGCTGCT TGCGTTCGTC
GCGTCTATGA ACGACTACGT CACCAGCTAC TTCTTGGCTG GTGCCGGCAT GACCACCTTG
CCTATGTACA TCTTCAGCGC ATTGAAGATC GGAATTACGC CAAAGGTAAA TGCTATCTCG
ACAGCCGTCA TTGGACTTTC GTCGATTCAA CTACTGACGG TCTGGGTTCT CGGCAGGAAG
GGTGCAGGAC AGACTGCTAC GCCGGGGAGA TCCGAGCTGG GTCACGCGAA CATTCAAACG
ATAGGAACCG TATGA
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| Protein sequence | MTSRELRHFP LTAEVAIAVL LFLYLPLAVV AWMSFNRGPS ALVWEGWSVQ GYVEAWSDPT
LIRATQNSLI LALSSMVLST ALATSAAVAA WSRQETRRSD LRGVVIALPL VIPEVVLAIA
TVMMFSIFAF EIGFVAVLFA HVVFCVPLAY LPINARLKTI DRTLLEAAAD LSAPPWAAFR
QITVPLALPG IVAGALLAFV ASMNDYVTSY FLAGAGMTTL PMYIFSALKI GITPKVNAIS
TAVIGLSSIQ LLTVWVLGRK GAGQTATPGR SELGHANIQT IGTV
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